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Mapping the Earth’s Hidden Fungal Kingdom
… with the Department of Energy (DOE) Joint Genome Institute (JGI)’s Fungal and Algal Science Program and JGI users have … one of the world's most comprehensive collections of fungal genomes. A sweeping analysis published in Nature Reviews … with a sampling puzzle of extraordinary complexity. Beyond the sheer number of undiscovered species lies an even …
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Data Policy & Support
… Read our research integrity and data code of conduct. … Data Management at the JGI … JGI Scientist Code of Conduct …
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JGI Accepts 17 Proposals for Community Science Program
… Monitoring Inter-Organism Interactions Within Ecosystems Latest … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … on Alaska’s glacially dominated Copper River Delta. They’re looking at how the microbes in these high latitude wetlands, …
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JGI@25: Building a Better Bean
… In honor of the JGI's 25th anniversary in 2022, we have … end, a team of researchers led by Jeremy Schmutz of the JGI and the HudsonAlpha Institute for Biotechnology; Phil … of the JGI; and Scott Jackson of the University of Georgia sequenced and analyzed the genome of the common bean. That …
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JGI Workshop at SIMB NP Meeting
… and their biosynthetic logics to be understood, accessing these untapped metabolic capabilities is often tedious … a given BGC in various hosts, availability of sequenced genomes, and computing resources needed to predict BGCs from … available genome sequences. The DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility, has been …
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Uncovering Novel Genomes from Earth’s Microbiomes
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … environments – that’s pretty remarkable.” Adding Value Beyond Genome Sequences Much of the data had been generated … over 500,000 existing genomes available at that time. “Looking across the tree of life, it’s striking how many …
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A User-Centered Approach to Accessing JGI Data
… When the JGI Data Portal (https://data.jgi.doe.gov/) launched last year, it was only accessible … common set of metadata. For Steve Wilson, JGI’s Systems Engineering group lead, the Data Portal reflects a structural … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Whole genome assembly from 454 sequencing output via modified DNA graph concept
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
… Accepted proposals emphasize JGI interests in algae and secondary metabolites. A total of 27 … range of environments. A similar proposal focused on diatom genomes from  Thomas Mock of the University of East Anglia … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… DNA Day on April 25. As both Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research that … I recently caught up with Karolina at the Plant and Animal Genomes, or PAG conference, when in-person meetings were … But for them to be able to pull that water through the whole plant system, they need to open these pores in their …
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Mindfully Moving JGI
… JGI is in the process of shifting its operations from Walnut Creek to the heart of the … labs in Building 100 were silent. Twenty years after the JGI united the genomics expertise of three national labs in … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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JGI & KBase at PAG XXVII
… XXVII Conference (PAG) takes place January 12-16, 2019, in San Diego, Calif. Representatives from the DOE Joint Genome Institute (JGI) and the  DOE Systems Biology Knowledgebase (KBase) will … integrative biology. Researchers who are applying genomic sequence information to BER-funded activities of plant …
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