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Comparison between Ribosomal Assembly and Machine Learning Tools for Microbial Identification of Organisms with Different Characteristics
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Picking Up Threads of Cotton Genomics
… Analysis reveals cotton genome stability across global lineages . Come harvest … authors of the  paper published April 20, 2020 in  Nature Genetics include Jane Grimwood and Jeremy Schmutz of JGI’s  … as a surgeon’s knowledge, and of gene editing as a new tool. In order to know exactly where to use your incredibly …
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PEATmoss (Physcomitrella Expression Atlas Tool): a unified gene expression atlas for the model plant Physcomitrella patens
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NAP: The Network Analysis Profiler, a web tool for easier topological analysis and comparison of medium-scale biological networks
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New Research Sheds Light on Diversity in the Deep Sea
… array of microorganisms adapted to living in extreme conditions. At these vents, and underwater volcanoes,  … and other biomolecules that could potentially be applied to biotechnology and medicine. A more robust understanding of … communities, with possible applications in biogeochemical engineering,  biofuel production and more. …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… natural diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth (Toby) Kellogg … (Danforth Center) drove up and down the highways of the continental United States, occasionally pulling over to the … resulted in a paper published October 5, 2020 , in Nature Biotechnology . Kellogg and her colleagues, along with …
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Better Genome Editing for Bioenergy
… technology to enable improvements in microbial oil production. The Science CRISPR-Cas9 is a powerful, high-throughput gene-editing tool that can help scientists engineer organisms for … their tool before felling their research problem: at a genetic level, how does  Y. lipolytica work? The project was …
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Whole-Genome rVISTA: a tool to determine enrichment of transcription factor binding sites in gene promoters from transcriptomic data
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Extracting the Secrets of Secondary Metabolites
… biosynthetic gene clusters.  The Science Microbial secondary metabolites, those molecules not essential for growth … Interspaced Short Palindromic Repeats) is the leading tool for accurately editing genomes, its effectiveness has … is a technique researchers can use to integrate large genetic payloads directly into diverse microbes. Combining …
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New and Improved: Eucalyptus Reference is Now Accessible
… assembly to support targeted tree breeding for the bioeconomy.   The Science Researchers report a new reference … in the July edition of the journal G3 Genes | Genomes | Genetics , with significant advances compared to the 2014 … having genomic resources to develop molecular breeding tools has been critical. The new improved genome assembly …
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Integrative visual omics of the white-rot fungus Polyporus brumalis exposes the biotechnological potential of its oxidative enzymes for delignifying raw plant biomass
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Yasuo Yoshikuni
… of the DNA Synthesis Science Program since 2015. The mission of this program is to harness the power of DNA synthesis, strain engineering, and biosystems design for DOE-mission-relevant … and renewable chemicals, developing genome engineering tools for non-model organisms, modulating microbe-microbe …
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