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Building Sphagnum Genomic Resources
Sphagnome data would enable researchers’ insights on their potential carbon cycling impact.   The Science … (Spruce and Peatland Responses Under Changing Environments) project, assessing how northern peatland ecosystems respond … under Contract No. DE-AC02-05CH11231. For the sphagnome project, germplasm establishment and maintenance is …
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Work With the JGI! Tips for a Winning CSP Proposal
… stage, anywhere in the world, for free. We accept new projects related to energy and the environment several times a year. A few proposal calls have … from Tanja Woyke, who runs user programs at the JGI, and project manager Miranda Harmon-Smith, who helps shepherd CSP …
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Igor Grigoriev
Institute, a Senior Scientist at Lawrence Berkeley National Laboratory, and an Adjunct Professor of Plant and … of California, Berkeley. He contributed to the Human Genome Project and led annotation and analysis of diverse … Dr. Grigoriev engaged thousands of researchers in genome projects and organized numerous genomics workshops. … Igor …
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Frederik Schulz
… the New Lineages of Life Group. His research is focussed on the discovery of novel bacterial, archaeal and eukaryotic … to the JGI user community and supports various user projects in the Microbial Program. In an LDRD-funded … (2011-2015) DAAD (“German Academic Exchange Service”) scholarship (2008-2009) VDI (“Association of German Engineers”) …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
Journal publication caps JGI pilot project with fledgling Florida high school … more about the microbial communities in the Arthur R. Marshall Loxahatchee National Wildlife Refuge, a 226-square …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
In a recent  Nature Genetics paper , researchers focused on the full composition of genes, or pangenome, of the model … resistance of plants to the Earth’s ever-changing harsh habitats, thus allowing them to spread across most of … plant lineages in the  Open Green Genomes Initiative , a project supported by the U.S. Department of Energy (DOE) …
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Silicon-rich soil amendments impact microbial community composition and the composition of arsM bearing microbes
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Partial genome sequence of the haloalkaliphilic soda lake bacterium Thioalkalivibrio thiocyanoxidans ARh 2T
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From Competition to Cooperation
Tracking evolution of symbiotic lifestyles across multiple fungal lineages. … of plant-host and mycorrhizal-fungal interactions. … The project was funded by the U.S. Department of Energy Joint … (CSP # 305), Metatranscriptomics of Forest Soil Ecosystems project (CSP # 570) and the 1000 Fungal Genome projects (CSP …
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Natural Prodcast Episode 23: Aaron Puri
… another episode of Natural Prodcast. Right now I’m working on this the afternoon of the day I’m due to release it, … in terms of their natural products chemistry, and he has a project with the JGI to synthesize the genes for and explore … part of that. And so I decided to completely change gears and go and do a postdoc with a woman named Mary Lidstrom …
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Microbiome Data Science Team
Biology is currently experiencing a revolution brought on by rapid developments in genomics and other … of genomes from uncultivated microbes (Nature 2019). Other projects in the group include the sequencing and comparative … of thousands of archaeal and bacterial type strains ( GEBA-type strains project ), the delineation of host-virus …
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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
This is the third and final episode of our series on a giant metagenome assembly from Wisconsin’s Lake … the specialized software and supercomputers behind this project. But every part of this project depends on lakewater samples — so this episode is a …
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