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Plant compartment and genetic variation drive microbiome composition in switchgrass roots
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Feed Your Friends: Do Plant Exudates Shape the Root Microbiome?
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Low-abundance populations distinguish microbiome performance in plant cell wall deconstruction
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Structure, function and diversity of the healthy human microbiome
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Wildfire-dependent changes in soil microbiome diversity and function
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Jeremy Schmutz
… with the JGI dates back to 1997, when he was working for the Stanford Human Genome Center, now the HudsonAlpha Institute for … For the past 13 years, Mr. Schmutz has directed the JGI Plant Program, focusing on the organization of community … Jeremy Schmutz is the Plant Science Program Head at the JGI. Click to learn more …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… of the Microbiome Data Prize by the American Society for Microbiology (ASM). Roux leads the Viral Genomics group within the JGI Metagenome Program, and … understand the role of viruses in natural ecosystems, and functionally explore viral genetic diversity.  In 2021, he …
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Building Sphagnum Genomic Resources
… model system focused on carbon cycling studies, rather than for food or fuel applications. The Impact Sphagnum’s impact … unparalleled model system for ecological and evolutionary genomics .” Understanding the nature and genetic basis of functional traits in sphagnum growth and decomposition is …
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STREAMS guidelines: standards for technical reporting in environmental and host-associated microbiome studies
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IMG/VR v4: an expanded database of uncultivated virus genomes within a framework of extensive functional, taxonomic, and ecological metadata.
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Novel and Emerging Capabilities that Can Provide a Holistic Understanding of the Plant Root Microbiome
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Interactions between plants and soil shaping the root microbiome under abiotic stress
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