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JGI@25: A Single Cell, Myriad Microbial Discoveries
… uncultured in laboratories. Other firsts followed. The next year, the JGI team reported the first closed and finished … JGI’s single cell genomics capabilities to assemble, identify, and characterize more than 200 microbial genomes that … microbial lineages from a variety of environments. In 2017, the first New Lineages of Life (NeLLi) workshop was held, …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… ranging from wetlands to tree islands to cattails. In 2018, the US Department of Energy (DOE) Joint Genome … comprehensive learning experience.” Over the course of the year, she and other JGI staff conducted several real-time, … publication in a reputable scientific journal. It was gratifying to see the empowerment displayed across each of their …
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iPHoP: A Matchmaker for Phages and their Hosts
… different routes. To train the model, the team used 1,870 known virus-host pairs to generate a matrix of data … of Energy Joint Genome Institute (https://ror.org/04xm1d337), a DOE Office of Science User Facility, is supported by …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… metagenomic sequencing and single-cell sequencing. For years, extracting single cells and then amplifying their DNA for genome sequencing was no easy task. The … of Energy Joint Genome Institute (https:// ror.org/04xm1d337), a DOE Office of Science User Facility, is supported by …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… working virtually with her JGI mentors for nearly three years after her internship. “That level of commitment and … in this publication during her summer internship in 2018. She selected one of the projects posted by JGI fungal … Adaptive Evolution . Mol Biol Evol. 2022 Feb 3;39(2):msab372.doi: 10.1093/molbev/msab372.   Byline: Ashleigh Papp …
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Work With the JGI! Tips for a Winning CSP Proposal
… related to energy and the environment several times a year. A few proposal calls have deadlines coming up – in …
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Meeting Report: “Metagenomics, Metadata and Meta-analysis” (M3) Workshop at the Pacific Symposium on Biocomputing 2010
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Nick Everson
He previously served as JGI’s Business Manager from 2007 to 2012, overseeing all financial and logistics … tenure with Berkeley Lab, he served in the US Navy for 6 years as a submarine electrician and a financial analyst in … on the Council of UC Staff Assemblies (CUCSA) from 2015 to 2018, representing Berkeley Lab in this UC-wide staff …
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Cultivating Symbiotic Antarctic Microbes
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Strain Engineering
The focus of this group, in recent years, has been to bring generalizable technologies to …
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Crysten Blaby-Haas
… and led the Quantitative Plant Science Initiative (2017-2022), a BER Science Focus Area (SFA). In 2022, she joined … heme-binding split-barrel family. J Biol Chem  300(11), 107888. Grosjean N, Yee EF, Kumaran D, Chopra K, Abernathy M, … to carbon metabolism in cyanobacteria. Nature Comm 15:3167. Hammack AT, Blaby-Haas CE. (2024) Machine learning sheds …
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Genome sequence of the Trifolium rueppellianum - nodulating Rhizobium leguminosarum bv. trifolii strain WSM2012
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