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JGI Pitches 2022 Visiting Faculty Program Collaborations
… November 3, 2021, the JGI and the Workforce Development & Education department of Lawrence Berkeley National …
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Viruses Reprogram Cells into Different Virocells
… State University and the University of Michigan studying how virus infections cause significant metabolic changes in … them. In the ocean, viruses outnumber surface microbes 10 to 1, and 20% to 40% of the microbes are infected at any … microbial cells that are transformed into virocells, and how the outcomes of these infections can affect the …
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DAP-seq Drives Robust Mapping of Gene Regulation
… view of plant evolution and adaptation.    Understanding how genes are regulated is like deciphering the complex … bioenergy and bioengineering applications. “We worked with 10 species ranging from grasses to broccoli and trees like … and integration with single-cell RNA sequencing reveals how transcription factors control gene expression and cell …
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Webinar: MycoCosm Tutorial
… ) on PhycoCosm tree with several sequenced genomes. 2.  Q: How exactly EcoGroups are built? A: EcoGroups are built … submit metadata and assembly at  https://gold.jgi.doe.gov 10.  Q: Is there any possibility to search for … annotation process (are these functional annotations) and how are these integrated within the platform? A: Please …
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Corals in Hot Water Get Help From Their Microbes
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Trent Northen
… to link genomes with environments to understand how webs of microbes cycle carbon and sustain biomes via the … in Metabolomics, The Scripps Research Institute Executive Education, UC Berkeley Haas School of Business DOE … starvation modulate root exudation. Science Advances, 2024 10(1), Schadt, C., Martin, S., Carrell, A. et al. An …
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2024 Progress Report
… presented and attended meetings around the world to showcase the JGI’s science and what we enable for our users. … I can say that a key area for the JGI’s evolution is in how we manage our data and how we can make this more accessible to our users. We will …
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Ian Blaby
… cell and metabolic differentiation. The Plant Cell . 27: 10, 2743-2769. 2015 Blaby et. al., The Chlamydomonas genome project: a decade on. Trends in plant science . 19: 10, 672-680. 2014 Blaby, et. al., Systems-level analysis of … Education …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… DNA outside a cell is key to interrogating what genes do, how they work, and applying them to environmental and energy … a series of case studies, JGI scientific users share how they’ve worked with the JGI DNA Synthesis Science … collaboration has been incredibly productive; more than 10 papers, including two Nature Plants publications, in five …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… communities. He’s focusing on the Arkansas River and how microbes might be influencing its health.  He sat down … hills, and it has legacy mining that goes back more than 100 years. And in particular, there’s an inflow from the … mining activities upstream and downstream of the Arkansas. However, recently, there’s been a major restoration effort. …
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Year in Review: JGI’s 2018 Progress Report Available Now
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
… at the Center for Scientific Research and Higher Education at Ensenada (CICESE) in her first microbial … Summer 2015 research experience at the JGI as part of an education program developed between the two institutions to …
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