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Draft Genome Sequence of Heavy Metal-Resistant Cupriavidus alkaliphilus ASC-732T, Isolated from Agave Rhizosphere in the Northeast of Mexico
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A mosaic monoploid reference sequence for the highly complex genome of sugarcane
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A versatile toolkit for high throughput functional genomics with Trichoderma reesei
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Industry Engagement Program
… Facilities — as well as their resources. It will identify high-value partnerships among members that catalyze data … generator, the JGI has a key role to play in providing high-quality, structured and curated data to support AI … accessible, AI-ready large-scale data repositories for genome information with analysis tools for mining and …
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Nigel Mouncey
… Dr. Mouncey joined the DOE Joint Genome Institute in 2017 as the fourth Director in its … traits. Dr. Mouncey has successfully built integrated and highly effective multi-disciplinary teams, and today, … to build and position JGI as a leading integrative genome science user facility.  In addition to serving as JGI …
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Data Ecosystem
… of new informatics tools specifically optimized for high-performance computing environments. … analyses, such as metabolic modeling, that go well beyond genome annotation and analysis. The JGI and KBase seek to … data on scales ranging from single genes and individual genomes to metagenomes to systems-level modeling and …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… working in 21 fields.  Congratulations to the  2022 Highly Cited Researchers from the JGI recognized for their … chosen field or fields through the publication of multiple highly cited papers during the last decade” by Clarivate … the JGI is sequencing thousands of bacterial and archaeal genomes from diverse branches of the Tree of Life.  Its …
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De novo Nanopore read quality improvement using deep learning
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Diel rewiring and positive selection of ancient plant proteins enabled evolution of CAM photosynthesis in Agave
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… Science Center (Danforth Center) drove up and down the highways of the continental United States, occasionally … Biotechnology and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … for nearly 600 green millet plants and released a very high quality reference S. viridis genome sequence. Analysis of …
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JGI@25: Using Team Science to Build Communities Around Data
… of reference genomes for fungal metagenomics. Two more CSP proposals came in 2016 that would complement these … The Open Green Genomes Initiative is the product of a 2018 Community Science Program proposal from James … plant genomics community. The project’s aim is to generate high-quality genome assemblies and annotations for 35 …
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Genome assembly and annotation of microalga Nannochloropsis oceanica C018.
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