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Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site
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Matthew Kellom
… Matt is broadly interested in the interactions between microbial life and environment, and using metagenomics to study these complex natural systems. Microbial communities living in hard-to-reach places that … are of particular interest. Matt also supports various CSP and FICUS user projects for the Metagenome Program. …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… team has comprehensively described host-virus dynamics in a microbial mat. The Science In microbial mats, communities of microorganisms live among … with their host indefinitely. Now, in studying a microbial mat from Cone Pool in Mono County, California, …
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How Maize Makes An Antibiotic Cocktail
… corn variety and protect maize by fending off fungal and microbial infections. Scientists had assumed that maize … Science Program . And the work is part of a  larger CSP Functional Genomics proposal to understand terpene  … a DOE Joint Genome Institute Community Science Program (JGI-CSP) grant (CSP2568 to P.Z., ES and AH), and by a …
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From Competition to Cooperation
… the framework of the Mycorrhizal Genomics Initiative (CSP # 305), Metatranscriptomics of Forest Soil Ecosystems project (CSP # 570) and the 1000 Fungal Genome projects (CSP # 662 & 1974). This research was also supported by the …
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Tanja Woyke Elected to American Academy of Microbiology
… National Laboratory (Berkeley Lab), Woyke has led JGI’s Microbial Genomics Program since 2009 and heads the Single … Biology Division of the Lab’s Biosciences Area since 2018. Woyke also holds appointments as Adjunct Scientist at … enormous impact her contributions have had on the field of microbial genomics. Her work in the areas of single-cell …
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Digging into Microbial Ecosystems Deep Underground
… at Colorado State University have many questions about the microbial communities deep underground, and before the …
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JGI Earth Month: Wetlands Work in #TenHundredWords
… Tringe , JGI’s User Programs deputy and head of the Microbial Systems group through the  DOE Office of Science … Student Research (SCGSR) program . Her research project, “Microbial Community Structure and Methane Production in … versions appear side-by-side below: Kaze was part of the  2018 cohort of the JGI-UC Merced Genomics Internship …
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Steven Wilson
… Since 2018, Mr. Wilson has served as the Systems Engineering Group … automated sequence quality control and automation of microbial/metagenomic assemblies, portals that make data … and Software Quality Assurance teams from April 2012 to 2018.        …
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Fungal Friends or Foes in Plant Roots
… determine if these fungi act as friends or foes. The Impact Microbial communities comprised of fungi and bacteria can … work was partly enabled by a JGI Community Science Program (CSP) proposal led by INRAE’s Francis Martin that contributed … Contract No. DE-AC02-05CH11231 within the framework of CSP 1974 “1KFG: Deep-sequencing of ecologically relevant …
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JGI@25: Strengthening Soybean
… with gasoline. Yet.  In 2010, soybean became the first legume species with a published complete draft genome …
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JGI@25: Using Team Science to Build Communities Around Data
… of reference genomes for fungal metagenomics. Two more CSP proposals came in 2016 that would complement these … The Open Green Genomes Initiative is the product of a 2018 Community Science Program proposal from James …
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