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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring … for sequences of RNA viruses in large data sets, their work may be akin to finding a single snowflake on a colored-in … resulted from a three-way collaboration that began in 2019, recalled Uri Neri of Tel Aviv University, one of the …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… On September 1, JGI held a JGI Engagement: Pro Tips for Successful … to the CSP  New Investigator call for proposals.  Tips: Contact us with your questions ([email protected]) … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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FICUS
… The Facilities Integrating Collaborations for User Science (FICUS) call represents a unique opportunity for researchers to … the capabilities and expertise of multiple DOE National User Facilities in one research proposal.  Successful … Proposals for the annual FICUS call with EMSL begin with a Letter of Intent (LOI) from a …
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The JGI Data Portal: Improving User Experience
… between the JGI and the information technology company Truss has resulted in the JGI Data Portal , a pilot download … — they’ll help us build a solid knowledge base that may inform future updates to one (or more) of the JGI … volunteering to participate in a user research session by contacting the JGI User Experience Group — once you complete …
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The Expanding Universe of Methane Metabolisms in Archaea
… insights into an ancient metabolism. Methane is a greenhouse gas 20 times more potent than carbon dioxide. Billions … at the NeLLi: New Lineages of Life Symposium in April, which immediately precedes the JGI’s 14th Annual … Hot Springs is a highly-reduced, suboxic system that may be analogous to environments found on early Earth.”  …
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EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems
… and applying these engineered ecosystems across various biological contexts. The program fosters intimate, … standardized fabricated ecosystems for microbiome research. Contact If you have questions or would like access to the … which has channels for finding roommates and carpools, contact Margie Lozano ( [email protected] ) …
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Simon Roux
… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome … the development of novel computational tools to identify virus sequences, the design of new experimental approaches to … Cell 185, 4023–4037. Coclet et al., 2023. Virus diversity and activity is driven by snowmelt and host …
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Year in Review: JGI’s 2018 Progress Report Available Now
… notable research and scientific collaborations in 2018. The cover is an image of Mono Lake, a saline soda lake … JGI (isolates here , here and here ), and the data has been used to better understand arsenic mobility and to better …
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Katherine Louie
… Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 became … the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass spectrometry-based techniques, the … composition of the root-associated microbiome in maize (Zea mays). Scientific Reports. 2021. …
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A Social Science Experience
… 2017 Summer Interns Share Highlights of their time at the JGI …
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FICUS Overview
… The Facilities Integrating Collaborations for User Science (FICUS) initiative was established in 2014 to encourage and enable researchers to more easily … User Programs …
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Adam Reisselman on being a 2016 DOE Computational Science Graduate Fellow
… with advanced computer skills. During the summer of 2016,  DOE CGSF recipient Adam Riesselman of Harvard …
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