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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… freshwater ecosystem works. When she set out to analyze 500 metagenomes from this sample set through the Community … have been filtered out as noise using more traditional methods. Thus far 25 terabases of metagenome data have been … The JGI provides integrated high-throughput sequencing and computational analysis that enable systems-based scientific …
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JGI Portals
… Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to all … of plasmids automatically identified from genomes, metagenomes, and metatranscriptomes. It provides rich data … of Uncultivated Viral Genomes, derived from genomes, metagenomes, and metatranscriptomes. It features over 15 …
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Uncovering Novel Genomes from Earth’s Microbiomes
… Despite advances in sequencing technologies and computational methods in the past decade, researchers have uncovered … to inform future analyses,” said José P. Faria, a KBase computational biologist at Argonne National Laboratory. “The … The JGI provides integrated high-throughput sequencing and computational analysis that enable systems-based scientific …
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Who We Are
… to large-scale datasets and analysis tools for genomes, metagenomes, and metabolomics through its data portals. …
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Natural Prodcast Episode 15: Katherine Duncan
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DNA Synthesis Program
… include developing innovative screening technologies and computational tools that enhance biofuel production and …
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How to Submit Sequencing Samples
… sends Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need help naming your …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… Marcel Huntemann, Nikos Kyrpides  and Simon Roux — features 600 genome sequences for Actinobacteria.  Woyke  was also … a haystack — until now. Scientists have recently created a computational pipeline that scans specifically for RNA virus … The JGI provides integrated high-throughput sequencing and computational analysis that enable systems-based scientific …
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Game On: High School Students Drive Everglades Metagenomics Study
… The JGI provides integrated high-throughput sequencing and computational analysis that enable systems-based scientific …
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A Bioinformatician's Guide to Metagenomics
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Behind the Paper: Hot Springs Metagenomics
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Simon Roux
… His responsibilities include the development of novel computational tools to identify virus sequences, the design …
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