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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between … tropics.”  Francis Martin will be a keynote speaker at the 2024 DOE Joint Genome Institute (JGI) Annual Genomics of … Walnut Creek Marriott the week of September 30 – October 4, 2024.  … The U.S. Department of Energy Joint Genome …
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A Plant Root Atlas for Tracking Developmental Trajectories
… patterns in the  Arabidopsis root, profiling nearly 100,000 single root cells and combining the information with … research by then-Biosciences scientist Diane Dickel in 2017. In 2019, plant single-cell methods were officially called out as …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
Serve the Changing Planet (download a copy at jointgeno.me/2024StrategicPlan .) This plan aligns the DOE Office of … In service of solutions that will impact society, the 2024 strategic plan introduces the JGI’s new vision to lead … for the next five years. It also includes more than 130 implementation milestones to help track and drive …
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JGI Hosts GPU Hackathon in May
WHEN: May 6-10, 2019 WHERE: JGI With DOE investments in graphical processing … organizing nearly a dozen hackathons around the world in 2019, only the JGI hackathon is particularly focused on … maximum of six teams will be hosted at the Hackathon, with 1-2 mentors per team. Participants will be expected to have …
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Alabama A&M Interns Access An Abundance of Knowledge
In 2024, the DOE Joint Genome Institute and Alabama A&M …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… high school scientists. The Florida Everglades evokes images of fanboats skimming over swamps, while alligators … ranging from wetlands to tree islands to cattails. In 2018, the US Department of Energy (DOE) Joint Genome Institute … project of the class, I knew that I wanted them to write a final paper that  could be published. Watching 18 students …
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JGI Launches Latest Strategic Plan
For the Joint Genome Institute, the end of 2018 was marked by a celebration of contributing over one … data repositories over its now 20-plus-year history. In 2019, the countdown has begun to the June dedication event of … Maxon, Biosciences Associate Laboratory Director, of the 100-page document with over 200 actionable milestones. JGI …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… to date. This paper  is the cover article for the April 2024 issue  of  Nature Plants .  “We wanted to better … led the work in collaboration with JBEI as part of the 2021 Laboratory Directed Research and Development (LDRD) … a DOE  Early Career Research Program (ECRP) award in 2021, which aims in part to build off of this work. Former JGI …
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The More the Merrier: Making the Case for Plant Pan-genomes
… with a maternal  B. distachyon parent (D plastotype) some 1.4 million years ago (Mya), while the S plastotype was a more recent event (0.14 Mya) with a maternal  B. stacei parent. The analysis also … and recent  B. hybridum accessions produced infertile F1 descendants (first offspring of the parents), posing the …
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Draft genome sequence of Trichococcus flocculiformis DSM 2094T isolated from bulking sludge in Germany.
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Uncovering Novel Genomes from Earth’s Microbiomes
… a wide range of research fields. A public repository of 52,515 microbial draft genomes generated from environmental … Using this massive dataset, Nayfach clustered the MAGs into 18,000 candidate species groups, 70% of which were novel … BGCs in  IMG/ABC (Atlas of Biosynthetic Gene Clusters) by 31%. ( Listen to this JGI Natural Prodcast episode on genome …
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Nigel Mouncey
Dr. Mouncey joined the DOE Joint Genome Institute in 2017 as the fourth Director in its 27-year history. He has a … the Wall of Environmental Genomics … Jensen, R. O. et al. 2024. Phylogenomics and genetic analysis of … gene expression. J Bacteriol. 180:5612-8. … AAAS Fellow (2024) Society for Industrial Microbiology and Biotechnology …
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