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DOE Metrics
FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal Actual … Goal = 91 days; Actual Operation = 24 days due to significant sequencer downtime related to the shelter-in-place. ††† … Illumina Goal Actual Total Actual % Goal FY 2009 Total 253 1003.887 397 20.58 170.58 812.73 8400 8626 103 Q1 2009 39.9 …
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A Community Resource for Secondary Metabolite Researchers
The Secondary Metabolism Collaboratory encourages user engagement. The … capability to store and accurately display eukaryotic and viral BGC sequences. Expansion of the SMC to include fungal, … the Secondary Metabolism Collaboratory  … Browse BGCs … Natural Prodcast: Jackie Winter and SMC …
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VEGA Symposium
Hosted by the JGI and co-organized with NIST,  the goal of the Viral EcoGenomics & Applications (VEGA) symposium was to … uncultivated viruses, understand the role of viruses in natural ecosystems, and functionally explore viral genetic …
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Towards optimized viral metagenomes for double-stranded and single-stranded DNA viruses from challenging soils
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Contrasting Life Strategies of Viruses that Infect Photo- and Heterotrophic Bacteria, as Revealed by Viral Tagging
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Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
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VPF-Class: taxonomic assignment and host prediction of uncultivated viruses based on viral protein families
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Microbial colonization and persistence in deep fractured shales is guided by metabolic exchanges and viral predation
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Viral and metabolic controls on high rates of microbial sulfur and carbon cycling in wetland ecosystems
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Ecological Assembly Processes Are Coordinated between Bacterial and Viral Communities in Fractured Shale Ecosystems
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Dan Rokhsar
Dr. Rokhsar joined the DOE Joint Genome Institute in 2000 as the founding Associate Director for Computational … which they have applied and refined in the sequencing and evolutionary analysis of over fifty plant and animal …
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Genomic features of bacterial adaptation to plants
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