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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… 2023 marked a decade since the inception of the flagship … A crowd of excited attendees consisting of current interns, mentors, alumni, and other staff gathered at the Integrative … cohort, representative mentors and alumni shared their perspectives on the program and how much it meant to be a …
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A Plant Root Atlas for Tracking Developmental Trajectories
… A collaborative team led by Geoffrey Schiebinger at the … zu Berlin   has developed an atlas that maps gene expression patterns in the  Arabidopsis root, profiling nearly … JGI Science Programs Deputy Axel Visel provided a broader perspective:  “ This exciting work is well aligned with the …
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JGI@25: Solving the Mystery of the Missing Oil
… In honor of the JGI's 25th anniversary in 2022, we have … using a DNA-based array developed at Berkeley Lab. Over the next decade, the JGI’s single cell genomics and metagenomics …   Terry Hazen on Oceanospirillales microbes   Terry Hazen Perspective on the Deepwater Horizon Oil Spill …
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Neha Varghese
… Neha’s key role is to design, benchmark, and apply bioinformatics software to enable analysis and interpretation of genomic and metagenomic data for JGI’s user community. … and implementation of microservices in conjunction with the IMG platform. …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… A genetic architecture that is characteristic of the sex … hermaphrodites, expressing both male and female gametes in one individual. But some, including shrub willow  Salix … researchers need to select and breed cultivars for the next generation. Understanding the mechanisms by which they …
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JGI Portals
… The JGI’s data stewardship expertise and infrastructure enable a broad … new algorithms, models and tools in support of DOE mission priorities. Data discoverability and accessibility are … July 22–July 24 for computing upgrades . We regret any inconvenience. Effective July 27, 2026, the JGI will move to a …
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MGM Workshop at Fisabio Summer School 2025
… Register here The workshop is addressed to students and professionals of biology, biomedical research, the health sciences … and biostatistics Several sessions will be devoted to training in the use of the Integrated Microbial Genomes & …
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JGI-UC Merced Interns Share Their 2021 Experiences
… 13 interns from UC Merced spent eight weeks working virtually with JGI mentors to investigate rigorous research projects, hone science presentation skills, and participate in … Blurring the Line Between Plasmids and Phages … Polymorphisms Created by Transposable Elements …
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A Genomic Perspective Across Earth’s Microbiomes Reveals That Genome Size in Archaea and Bacteria Is Linked to Ecosystem Type and Trophic Strategy
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Generation of Transcript Assemblies and Identification of Single Nucleotide Polymorphisms from Seven Lowland and Upland Cultivars of Switchgrass
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Emiley Eloe-Fadrosh
… Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research … ecology and metagenomics. Her current research focuses on leveraging thousands of metagenomic datasets from … Microbiology Initiative. She conducted her postdoctoral training in human microbiome research at the Institute for …
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Igor Grigoriev
… Grigoriev joined the JGI in 2003, following his postdoctoral training at UC Berkeley and work in the pharmaceutical … at the JGI, a Senior Scientist at Lawrence Berkeley National Laboratory, and an Adjunct Professor of Plant and … Igor Grigoriev is the Fungal & Algal Science Program Head at the JGI. Click to learn …
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