Results
… (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any other … annotation, comparative analysis, and interpretation of sequence, metabolomics, and functional genomics data types … of user research. The crucial elements are proposal Award DOI(s), JGI’s ROR ID number, DOE contract numbers …
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… stories about natural products, so you can get a feel for why I think they’re so important, and we’ll start to explain … more about some of the background and sort of the reasons why we want to do this. And also to provide a little more … of the fun things that I hope that I can express today is why secondary metabolism is interesting and why it is that …
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… you maybe explain what’s going on with their biology and why they’re so important to natural products? ERIC: Sure. … turns a peptide, for example, from a disordered sequence into an antibiotic that kills bacteria through a … the ocean are doing. And specifically, they’re aimed outwards at the behavior of other animals. And so they are …
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… aiming for the first Thursday of the month moving forward. So, that’s the schedule, I’m committing to it, and you … And at the time, it was really exciting when people would sequence [DNA]. The genome was– well, that hadn’t really … polyketide synthase and then P3. We still don’t know why 20 years later. JACKIE WINTER: It’s pretty amazing, …
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… at JGI and the other participating facilities, is then forwarded to DOE for final approval. Following DOE approval, … … For sequencing projects, once work is under way, raw sequence data is released to NCBI’s Sequence Read Archive on a regular basis, in accordance with …
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… at genomes and seeing where the really hard things to sequence were, and wondering what those … what those were … functional was these secondary metabolite pathways. So why was that? What is it about secondary metabolite pathways … have against pathogens from the clinic. At that point, isolates get shipped to us in Wisconsin, and we try and use …
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… out introns and dealing with, you know, weirdness in the sequence. You know, some clusters are not clustered… … it so easily with fungi. So… NANCY: Yeah, I don’t know why. For example, with that – actually there’s a good talk … this and that. They’re doing all this 16S and I said, “Why don’t you just include the ITS too? It’s so easy to add …
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… learned a lot so much history from this conversation about why the ocean was basically unexplored until the 70s, and … not know what to do. We did not know how to culture marine isolates from the ocean. We didn’t know whether to study … forward to seeing the data when it finally gets off the sequencers. The pandemic has obviously slowed JGI down a …
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… at JGI start with sequencing, but where else did those sequences go? Like, what are the other scientific tools we … that describe the work. In general. Scientific merit and why it’s important. The DOE mission is one of these … WILHELM: Yeah. That makes sense. And then, if we fast forward to the end of a successful project, can you talk a …
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… then genomics happened. Dan: Yeah, I did my first genome sequence with you. Brad: That’s right, Dan: JGI did it in … working with you, Dan, on this one, and we said, “Well, why don’t we have you know, the bioinformaticians go against … to correlate chemical to genes. We’re hoping we can move forward and we’re challenging our colleagues at Monterey Bay, …
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… and targeted metabolomics support for DOE-BER funded awards, including awards funded through BER Funding … capabilities and products . A minimum request of 1 Tb of sequence data is required to qualify for BERSS. For DNA … and personnel resources for genomic research and sequence-based science. Projects include de novo generation …
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