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The JGI has diverse capabilities in: DNA and RNA sequencing, Sample … Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the standard analysis is …

The JGI’s Metabolomics Program works to uncover the roles of small … can provide novel insights into the impact of microbial symbionts and their hosts on ecosystems.   Environmental …

DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … more than 50,000 genomes that we derived from meta-genome sequences. As always, you’ll find transcripts and show notes … for us– what organisms people use for genome mining, why it’s called genome mining, how the biosynthetic gene …

… of their synthases so that we can start to use the DNA sequence to predict or just understand better the language … your interest in getting into natural products. DAN: Why are you here at SIMB? AARON PURI: Yeah. Thanks Jackie. … we also see with methanotrophs, which are also known to be symbionts of things like invertebrates like mussels. DAN: …

The JGI’s Microbial Program focuses on using cutting-edge sequencing, … analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … resequencing, RNA sequencing and epigenomics. Expansion of sequence space:  The JGI generates reference genomes from …

…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a … at Lawrence Berkeley National Laboratory. The JGI consists of around 280 researchers and support staff in the …

…   The JGI’s Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … computational analyses of BGC size and complexity, BGC sequence composition, metabolic similarity & compatibility, …

The mission of the Joint Genome Institute is to serve the scientific community as a user facility pioneering functional genomics to solve … … For sequencing projects, once work is under way, raw sequence data is released to NCBI’s Sequence Read Archive on …

… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … there are any kind of dated references to the news, that’s why. But it was a really fun conversation. And I think … it would work, but we actually found fosmids. And we sequenced the whole fosmid at the time with Sanger …

Developed in 2017, the PDT was established in part to help better-connect industry to … works closely with the Berkeley Lab Intellectual Property Office to facilitate these new interactions.  The PDT … sequencing and other resources at the JGI for projects of relevance to Department of Energy missions. Click to …

Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society for Industrial … enzymes are, right? ALISON NARAYAN: Yes, and so that’s why I don’t like that sentence. I think that sometimes, we … association that might help? Like, if you have an unknown sequence or new flavin monooxygenases, you could say, oh …

Plants are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental microbial pathogens, and associated …