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… here today, and we wanted to talk to her about a whole list of things. So we have a Scripps background shared together, … Duncan: Yeah. I love actinomycetes. Dan Udwary: Tell us why. I mean, I know, but I think– Alison Takemura: I want to … of almost finished characterizing them. We’ve got genome sequences, which are just incredible. We’ve looked at the …

The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, … aims to streamline genome analysis workflows for microbial eukaryotes, build fungal and algal pangenomes, and integrate … The  1000 Fungal Genomes Project is a five-year project to sequence 1000 fungal genomes from across the Fungal Tree of …

The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the annotation and analysis of (meta)genomic, (meta)transcriptomic, and functional … distribution of microbial genome and microbiome datasets sequenced at the JGI. IMG/M is also open to scientists …

Christa Pennacchio   … You can visit the Products & Offerings section of our website for more details, including a downloadable … I request a culture/slant/DNA of an organism that has been sequenced at the JGI? … How do I check the current status of …

… then genomics happened. Dan: Yeah, I did my first genome sequence with you. Brad: That’s right,  Dan: JGI did it in … working with you, Dan, on this one, and we said, “Well, why don’t we have you know, the bioinformaticians go against … Patrick would spend time between our two laboratories doing metagenomics, some genomics. We were a little concerned …

…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national … at Lawrence Berkeley National Laboratory. The JGI consists of around 280 researchers and support staff in the …

… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … (2023) Unraveling the functional dark matter through global metagenomics. Nature . 622(7983):594-602. Camargo AP. et al. … al. (2017) Protein structure determination using metagenome sequence data. Science   355(6322):294-298 Paez-Espino D. et …

… work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Department of … with some of the latest developments in microbial genomics, metagenomics, and computational biology, and to empower them …

Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of … offers the first quantitative Stable Isotope Probing (SIP) Metagenomics pipeline that utilizes internal analytical … access to cutting-edge cell sorting, DNA amplification, and sequence analysis to recover the genomes of uncultivated …

Hey, everyone! Welcome to the “Self Promotion Episode” of Natural Prodcast. A little bit of a bonus episode, since … is like, what’s your origin story in natural products? Why are you doing this? JACLYN WINTER: I’ll kind of go back … have an E. coli strain that we’ve been working on that we sequenced the genome. And it has 17 resistant genes on a …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … out introns and dealing with, you know, weirdness in the sequence. You know, some clusters are not clustered…   … it so easily with fungi. So…   NANCY: Yeah, I don’t know why. For example, with that – actually there’s a good talk …

The mission of the Joint Genome Institute is to serve the scientific … … For sequencing projects, once work is under way, raw sequence data is released to NCBI’s Sequence Read Archive on a regular basis, in accordance with …