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… one of the best things that we do is work with this really great group of biologists that know what they’re doing much … does some really exciting work there. And I thought, well, why don’t we try to go to Alaska and see what we can find … with any kind of gene cluster identification, doing it with sequence alone you have to have some kind of a template to …

… sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the standard analysis is … in length, cloned into vector of choice Glycerol stock of sequence verified clone 102/NA DNA Synthesis Constructs … physical separation of a biologically relevant unit from a microbial community, such as a microcolony, microbial …

… program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will … in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Department of … builds upon thousands of microbial genomes that have been sequenced by the JGI though not formally analyzed or …

… working on it because I really do want you all to hear this great conversation with Aaron Puri. He is an Assistant … of their synthases so that we can start to use the DNA sequence to predict or just understand better the language … your interest in getting into natural products. DAN: Why are you here at SIMB? AARON PURI: Yeah. Thanks Jackie. …

… of challenges that usually lead to surprises and really great discoveries! And Eric’s done an awesome job, in that … you maybe explain what’s going on with their biology and why they’re so important to natural products? ERIC:  Sure. … turns a peptide, for example, from a disordered sequence into an antibiotic that kills bacteria through a …

… … DAN UDWARY: Hey, everyone. I’ve got a great episode for you here today. We got the opportunity to … learned a lot so much history from this conversation about why the ocean was basically unexplored until the 70s, and … forward to seeing the data when it finally gets off the sequencers. The pandemic has obviously slowed JGI down a …

A global metagenomic map of urban microbiomes and antimicrobial resistance. Cell . 184(13):3376-3393 Almeida A, et … al. (2017) Protein structure determination using metagenome sequence data. Science   355(6322):294-298 Paez-Espino D. et … reveals a new bacterial candidate phylum in geothermal springs.  Nature Commun. 7:10476 Varghese NJ,  et al. …

Cooperative Biodiversity Groups, and it’s this great program funded by the National Institutes of Health … Apple Podcasts or wherever you’re getting this and tell me why you’re listening. DAN: But, now, here’s Natural Prodcast … And that’s been followed by developments in pulse sequences and improvements in the ways in which you acquire …

… about the basics of genome mining, which is using DNA sequence to identify and interpret biosynthetic, secondary … biological perspective, like what was this bacterium, and why did your group want to study it? Marnix Medema: You mean … Two fanatic PhD students. Alison Takemura: It sounds great. Yeah, it sounds like it was really needed at that …

… after listening to this, you think you actually do have a great project that would awesome for a CSP, or if you’re a … at JGI start with sequencing, but where else did those sequences go? Like, what are the other scientific tools we … that describe the work. In general. Scientific merit and why it’s important. The DOE mission is one of these …