Search

… pipelines.  You will receive automated emails as raw sequence data becomes available, and as analysis is …

… DNA Synthesis and Single-Cell Genomics Vivian Ng Fungal Genomics …

… what we know is they’re quite selective in some way for antifungal activity. They are also, some of them, are … does some really exciting work there. And I thought, well, why don’t we try to go to Alaska and see what we can find … with any kind of gene cluster identification, doing it with sequence alone you have to have some kind of a template to …

… in doing so enabled the JGI to be the first to publish the sequence analysis of the target chromosomes 5, 16, and 19, …

… least, talk to us, first about my definitions of things and why I am wrong, and also talk about some of the great … Yeah, so any metabolite, produced by bacterial or fungal metabolism by microbes, will have a functional role. … to approach it is more related to what JGI does, which is sequence genomes. And we just published last year in the …

… at JGI start with sequencing, but where else did those sequences go? Like, what are the other scientific tools we … And I think also the quality that we provide. So for fungal and for a lot of our eukaryotic genomes, all our … that describe the work. In general. Scientific merit and why it’s important. The DOE mission is one of these …

… Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a … from decaying organic matter (saprobes), and many plant pathogens known to infect most major food crops and … Dothideomycetes genomes were conducted as part of the 1000 Fungal Genomes Project supported by the JGI Community …

… fungi remain largely mysterious. Only about 200,000 fungal species have been named. Among those sequenced, roughly half of all genes have completely unknown … for prediction of fungal lifestyles based on genome sequences.” The Fungal Knowledge Gap The fungal kingdom …

… For sequencing projects, once work is under way, raw sequence data is released to NCBI’s Sequence Read Archive on a regular basis, in accordance with …

… there are any kind of dated references to the news, that’s why. But it was a really fun conversation. And I think … metabolites evolve– who makes them, how do they spread, why do they spread in a certain way from one bacteria to … it would work, but we actually found fosmids. And we sequenced the whole fosmid at the time with Sanger …

… four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between … at Lawrence Berkeley National Laboratory (Berkeley Lab) sequenced 1 trillion bases — a terabase — of soil RNA for … symbionts shuttle water and nutrients to trees; plant pathogens colonize living plants to feed on them.  Across …

… Microbial (IMG–ER) Metagenome and Single Cell (IMG/ M-ER) Fungal (Mycocosm) Algal (Phycocosm) … I request a culture/slant/DNA of an organism that has been sequenced at the JGI? …