Search

… by those generating data. The JGI Data Policy applies to research data and analysis products (referred to as “data” for … Director’s Science (DS), Biological and Environmental Research Support Science (BERSS), or Bioenergy Research Centers (BRCs). Overview … embargo starting at construct or strain delivery.  Detailed sequence information and constructs are made publicly …

… there are any kind of dated references to the news, that’s why. But it was a really fun conversation. And I think … again? DAN UDWARY: I was just asking if the Scripps research … NADINE ZIEMERT: Oh, yeah, Scripps. Yeah. DAN … it would work, but we actually found fosmids. And we sequenced the whole fosmid at the time with Sanger …

… And at the time, it was really exciting when people would sequence [DNA]. The genome was– well, that hadn’t really … polyketide synthase and then P3. We still don’t know why 20 years later. JACKIE WINTER: It’s pretty amazing, … have to do a 10,000-fold dilution to plate that out. The deeper you go in the cave, the less dilution. You can be …

… thrive, and even support entire ecosystems. Hear from researchers Anna-Louise Reysenbach, Emily St. John, Gilberto …

… least, talk to us, first about my definitions of things and why I am wrong, and also talk about some of the great … observation of the work of anybody who has been doing research in this field– is that that’s true for one compound … to approach it is more related to what JGI does, which is sequence genomes. And we just published last year in the …

… problems.  The mission of the National Energy Research Scientific Computing Center ( NERSC ) is to … The researcher then submits a proposal for consideration in the … For sequencing projects, once work is under way, raw sequence data is released to NCBI’s Sequence Read Archive on …

… enzymes are, right? ALISON NARAYAN: Yes, and so that’s why I don’t like that sentence. I think that sometimes, we … association that might help? Like, if you have an unknown sequence or new flavin monooxygenases, you could say, oh … corn to sponsor the podcast? DAN UDWARY: Sponsor Alison’s research? JACKIE WINTER: Yeah, there we go. DAN UDWARY: …

… program for undergraduate majors interested in developing a deep understanding of STEM teaching & learning. Their …

…   Visualizing a novel, candidate viral genome found in the deep subsurface ecosystem. The Science Altiarchaea are … representatives of deep subsurface ecosystems. A team of researchers described how the viruses repeatedly attempted to … at virus infections. Their genomes include short DNA sequences that code for CRISPR systems, which help bacteria …

… learned a lot so much history from this conversation about why the ocean was basically unexplored until the 70s, and … stages. But I think that is emblematic of some of the research that you’ve been doing the last couple of years. And … forward to seeing the data when it finally gets off the sequencers. The pandemic has obviously slowed JGI down a …

… with 86 participants in an online workshop to harness deep learning for metagenomic data.  Metagenomic data, or … of proteins in order to conduct more efficient protein sequence alignments. He also aims to detect structural … Deep learning algorithms can vectorize faces… … so, why not proteins?         …

… Our research is focused on the discovery and characterization of … and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, … impact microbiome structure and biogeochemical cycles. Research Team    … our understanding of viral complexity and evolution Our research focuses on discovering and characterizing giant …