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The mission of the Joint Genome Institute is to serve the scientific … Science through high performance computing (HPC) and data analysis.  The DOE Systems Biology Knowledgebase ( KBase ) … … For sequencing projects, once work is under way, raw sequence data is released to NCBI’s Sequence Read Archive on …

Below is a brief description of the process needed to prepare and ship samples for … pipelines.  You will receive automated emails as raw sequence data becomes available, and as analysis is completed. You can view the status of your …

… more than 50,000 genomes that we derived from meta-genome sequences. As always, you’ll find transcripts and show notes … bacteria, because it is so easy to sequence their genomes comparatively to especially plants. So yeah, so from there, … for us– what organisms people use for genome mining, why it’s called genome mining, how the biosynthetic gene …

Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to … data. The JGI Data Policy applies to research data and analysis products (referred to as “data” for the remainder … embargo starting at construct or strain delivery.  Detailed sequence information for constructs are made publicly …

… workflow, and is responsible for the annotation and analysis of (meta)genomic, (meta)transcriptomic, and … distribution of microbial genome and microbiome datasets sequenced at the JGI. IMG/M is also open to scientists … of genome and metagenome datasets in a comprehensive comparative context. The IMG data warehouse integrates …

… artificial Intelligent/machine learning approaches in data analysis and interpretation is creating new opportunities … Other projects in the group include the sequencing and comparative analysis of thousands of archaeal and bacterial … al. (2017) Protein structure determination using metagenome sequence data. Science   355(6322):294-298 Paez-Espino D. et …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … the paradigm of how to discover natural products. So, why I’m very excited to be working with Dan, you, with the … develop enabling technologies. ie how to translate the ATGC sequence into discrete small molecules. So, Dan, I’m very …

… capabilities support researchers exploring how to convert sequence into functional assessments. This is done by … and novel automations for DNA design, assembly and analysis Overview of synthesis products The JGI DNA Synthesis platform enables …

… is like, what’s your origin story in natural products? Why are you doing this? JACLYN WINTER: I’ll kind of go back … have an E. coli strain that we’ve been working on that we sequenced the genome. And it has 17 resistant genes on a … a BGC fragment can be useful in some way if you’re doing comparative analysis. We want to make sure we had everything …

… functional genome annotation, improves understanding of the role small molecules play in diverse biological … based methods in combination with advanced computational analysis.   Overview of metabolomics products At JGI, … your results as well as our library standards. … Metabolite Analysis & Metabolomics Instrumentation … Metabolite …

… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a … least, talk to us, first about my definitions of things and why I am wrong, and also talk about some of the great … to approach it is more related to what JGI does, which is sequence genomes. And we just published last year in the …

…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national … at Lawrence Berkeley National Laboratory. The JGI consists of around 280 researchers and support staff in the …