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… joined the JGI in 2017, he brought with him 20 years of industry experience — and an opportunity to expand the … and environmental samples by using advanced computer analysis coupled with liquid chromatography mass … large-scale data repositories for genome information with analysis tools for mining and prediction The JGI works in …

… The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, … and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the biological … into practical applications, including sustainable biofuels, biomaterials, natural products, and environmental …

… Below is a brief description of the process needed to prepare and ship samples for … sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been the rate-limiting … step for many projects at the JGI. The quality of the starting material is one of the greatest predictors …

… The mission of the Joint Genome Institute is to serve the scientific … relevant bioenergy and environmental problems.  The mission of the National Energy Research Scientific Computing Center … Science through high performance computing (HPC) and data analysis.  The DOE Systems Biology Knowledgebase ( KBase ) …

…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national … at Lawrence Berkeley National Laboratory. The JGI consists of 225 researchers and support staff in the Integrative … organisms. We provide access to large-scale datasets and analysis tools for genomes, metagenomes, and metabolomics …

… more than 50,000 genomes that we derived from meta-genome sequences. As always, you’ll find transcripts and show notes … bacteria, because it is so easy to sequence their genomes comparatively to especially plants. So yeah, so from there, … for us– what organisms people use for genome mining, why it’s called genome mining, how the biosynthetic gene …

… Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to … the need to have a limited and time-sensitive protection of certain types of data to support their use by those … data. The JGI Data Policy applies to research data and analysis products (referred to as “data” for the remainder …

… Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology teaching labs. The purpose of the program is to: train students and professors in … through isolation and genome sequencing of new fungal species.  Students collect fungi, sterilize tissue, isolate …

… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … artificial Intelligent/machine learning approaches in data analysis and interpretation is creating new opportunities … the Kyrpides group focuses on Microbiome Data Science and analysis of Big Data. The Research Team   …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … the paradigm of how to discover natural products. So, why I’m very excited to be working with Dan, you, with the … develop enabling technologies. ie how to translate the ATGC sequence into discrete small molecules. So, Dan, I’m very …

… The purpose of this policy is to establish communication norms around … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any other contributions, such as assembly, analysis, annotation, verification, creation of genome …

… is like, what’s your origin story in natural products? Why are you doing this? JACLYN WINTER: I’ll kind of go back … have an E. coli strain that we’ve been working on that we sequenced the genome. And it has 17 resistant genes on a … a BGC fragment can be useful in some way if you’re doing comparative analysis. We want to make sure we had everything …