Search

Prodcast. And it’s our conversation with Nadine Ziemert from the University of Tübingen in Germany. Like me, she’s a … there are any kind of dated references to the news, that’s why. But it was a really fun conversation. And I think … it would work, but we actually found fosmids. And we sequenced the whole fosmid at the time with Sanger …

… by Science Program.  … The majority of JGI projects come from the user community. Find out about JGI’s calls for … Mycocosm (citation: https://doi.org/10.1093/nar/gkt1183 ) Algae: Phycocosm (citation: … I request a culture/slant/DNA of an organism that has been sequenced at the JGI? … How do I check the current status of …

… were able to identify specific genes that allow the algae to adapt to sudden drops in salt levels, enabling it … more fresh water — and less salt — near the surface where algae grow. Armed with a better understanding of the alga’s … Biology article highlights how one microalga collected from water on the ice surface handles such fluctuations. P. …

… conversation with Aaron Puri. He is an Assistant Professor from the Chemistry department at the University of Utah, so … of their synthases so that we can start to use the DNA sequence to predict or just understand better the language … your interest in getting into natural products. DAN: Why are you here at SIMB? AARON PURI: Yeah. Thanks Jackie. …

… prefers to be known among friends in natural products. He’s from Langebio in Irapuato, Mexico, and an incredibly bright … least, talk to us, first about my definitions of things and why I am wrong, and also talk about some of the great … to approach it is more related to what JGI does, which is sequence genomes. And we just published last year in the …

Laboratory. Being a User Facility means that scientists from all over the world bring us big problems related to … stories about natural products, so you can get a feel for why I think they’re so important, and we’ll start to explain … more about some of the background and sort of the reasons why we want to do this. And also to provide a little more …

… week, we have our conversation with Professor Eric Schmidt, from the University of Utah. I’ve known Eric for a long time … you maybe explain what’s going on with their biology and why they’re so important to natural products? ERIC:  Sure. … turns a peptide, for example, from a disordered sequence into an antibiotic that kills bacteria through a …

… you’ll be hearing about microbiology and natural products from the Great Salt Lake, and you’re going to learn, like … is like, what’s your origin story in natural products? Why are you doing this? JACLYN WINTER: I’ll kind of go back … have an E. coli strain that we’ve been working on that we sequenced the genome. And it has 17 resistant genes on a …

…     Our homepage video includes external footage from:  University of Delaware Laura.Selbmann©PNRA. All the … in doing so enabled the JGI to be the first to publish the sequence analysis of the target chromosomes 5, 16, and 19, … BER’s energy and environmental mission objectives. Fungi, algae, bacteria, archaea, viruses, and microbial communities …

… resequencing, RNA sequencing and epigenomics. Expansion of sequence space:  The JGI generates reference genomes from diverse bacterial and archaeal lineages to improve … of microbial communities based on their metagenome sequence, in the context of reference isolate genomes …

The ranked proposal list, along with a recommendation from management at JGI and the other participating … … For sequencing projects, once work is under way, raw sequence data is released to NCBI’s Sequence Read Archive on a regular basis, in accordance with …