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Environmental Genomics Group
… communities and ecosystem function.  The Environmental Genomics group also hosts the Viral Genomics group . Research Team    … of microbial ecology and metabolism by elucidating the functional potential of hard-to-culture microorganisms. This … from labeled nutrients into biomass. When paired with metagenomics, qSIP can decipher active microbial functions in …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… Synthesis Science group held a  JGI Engagement: Accessing Functional Genomics Capabilities Webinar inviting researchers to submit white papers to the … described in this webinar only offered through the CSP Functional Genomics call? A(nswer): It’s also possible …
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Frequently Asked Questions: Proposal Submission
… Review the list of open calls ; click on the call link to see specific details including project types … have an account) and click the “Begin” button for the call you are interested in. All proposals must be written in … The CSP and FICUS calls are open to both domestic and …
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Frequently Asked Questions: Project Management
… projects come from the user community. Find out about JGI’s calls for proposals , and submit your proposal online using …    For commonly asked questions about JGI’s proposal calls and proposal submission, as well as examples of … ) The following tools are available for functional annotation/curation of your genomes Microbial …
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DNA Synthesis Program
… solutions.  The program has been a pioneering effort in functional genomics since 2012, with a focus on addressing critical … The DNA Synthesis Program plays a central role in advancing functional genomics, focusing on developing genetic systems that can … and plant metabolite biosynthesis, synthesizing and biochemically analyzing enzymes to support mission-driven research. …
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Viral Genomics Group
… constraints exerted by viruses. Research in the viral genomics group aims at improving our collective … ecosystem-level impacts of viral infections. The Viral Genomics Group is hosted within the Environmental Genomics group . Research Team … ( Who is active when/where, and how? ). The JGI Viral Genomics group attempts to address this question in natural …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… Pro Tips for Successful Community Science Program (CSP) Applications Webinar inviting researchers to submit white papers to the CSP  New Investigator call for proposals.  Tips: Contact us with your questions … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Natural Prodcast Episode 16: Marcy Balunas
… is a great question because my path has been what I would call circuitous. I didn’t follow the traditional sort of … of– I think there’s only a couple of programs that actually call it that anymore.  DAN: Yeah, I had to explain the word … is, kind of. But not the same way this is designed specifically to house symbiotic bacteria. And so that has a …
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FICUS-NERSC/KBASE
… the scientific community as a user facility pioneering functional genomics to solve the most relevant bioenergy and … past collaborations, the DOE JGI, NERSC and KBase issued a call for proposals in biological data science as part of the …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… Hey, Dan. DAN UDWARY: So I guess this is now– we’ll call this the second season of Natural Prodcast. We’ve both … streams. This will all become clearer as we get into the genomics. So– ALISON TAKEMURA: I’m just enjoying the ride … IMG data portal , which is a larger portal for microbial genomics. IMG stands for Integrated Microbial Genomics. It’s …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… pathways, which led her to a successfully funded JGI CSP project. And we also got to talk about work at her … little bit of your background because you do-- you're classically trained as a synthetic chemist. BETSY PARKINSON: Yes. … based on what component they might be interested in like genomics, metabolomics, just basic chemistry, natural …
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Microbial Program
… single-cell sequencing, resequencing, RNA sequencing and epigenomics. Expansion of sequence space:  The JGI generates … three domains of life. It provides tools for analyzing the functional capability of microbial communities based on … featuring the largest collection of plasmids automatically identified from genomes, metagenomes, and …
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