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Offerings & Capabilities
… The central mission of the JGI’s Genomic Technologies department is   ensuring users have access to … by generating data in three overarching categories: DNA Sequencing , DNA Synthesis and Metabolomics .  Many users … To meet these needs, the JGI deploys state-of-the-art sequencers and platforms dedicated to synthesis, single-cell …
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Examples: Successful LOIs & Submissions
… Linking lignin engineering to drought stress resilience: RNA-seq and metabolomic insights in lignin biosynthetic pathway … Microbial contributions to soil carbon storage during simulated range shifts of plant-fungal … of simplified soil communities with high and low carbon use efficiency across differing moisture treatments …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… more than 50,000 genomes that we derived from meta-genome sequences. As always, you’ll find transcripts and show notes … wise maybe, what genome mining is, then, is looking at DNA sequence and trying to find the things that you want to … oxidative conversions and do some really complicated carbon skeleton rearrangements, chemistry that we probably …
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Natural Prodcast Episode 23: Aaron Puri
… about. He works with methylotrophs, which are a group of carbon-fixing bacteria that I would say are are still fairly … of their synthases so that we can start to use the DNA sequence to predict or just understand better the language … in Seattle . And she studies bacteria that grow on one-carbon compounds like methanol and methane. And I really …
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Overview of the Genomes OnLine Database (GOLD)
… TBK Reddy gives an overview of the JGI's Genomes OnLine Database and why …
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Metabolomics Program
… The Metabolomics Program focuses on advancing tools and technologies to analyze metabolites in environmental … analysis. Click for more details, including an overview of our products.  …
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Natural Prodcast Episode 14: Nigel Mouncey
… NIGEL MOUNCEY: Oh, sure. I think our legacy obviously is in sequencing.  DAN: Of course.  NIGEL MOUNCEY: Sequencing the wazoo out of anything that’s relevant to the … MOUNCEY: Oh, yeah, I think it hits in all parts of our technologies. Nowadays people are really looking at these …
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Microbiome Data Science Team
… on by rapid developments in genomics and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … (Nature 2019). Other projects in the group include the sequencing and comparative analysis of thousands of archaeal …
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Natural Prodcast Episode 18: A CSP Primer
… Science program. It used to actually stand for Community Sequencing Program. Also CSP, same acronym. But as JGI, as a … kind of field. And so having access to all the technologies that the JGI has can really benefit secondary … and work within the DOE emission space of bioenergy, carbon cycling, biogeochemistry, bioproducts. So we cannot …
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Special Initiatives & Programs
… Overview The JGI provides sequencing, synthesis, and … capabilities and products . A minimum request of 1 Tb of sequence data is required to qualify for BERSS. For DNA … a core facility instead. Proposals may not exceed 10 Tbp sequencing, 500 kbp synthesis, and 200 polar/500 nonpolar …
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Frequently Asked Questions: Project Management
… manager may then schedule and allocate resources for DNA sequencing. … Guidance on international shipments can be found in the Sequencing Sample Overview file in our HERE (TK) .  Note: the JGI does not … the blue “reports” button on the right side. The Project Overview report includes project-level metadata such as the …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… discoveries and developing transformative bio-based technologies that address challenges in the sourcing, … they then ship samples—such as DNA and RNA for sequencing—to JGI. Users are responsible for covering the … sample collection, and shipping; JGI will handle all subsequent processing from that point. JGI provides users with …
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