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… The DNA Synthesis Science User Advisory Committee is chartered … key external advisory panel and advocates of Program strategy, operations, and scientific relevance and quality. …

… The CSP New Investigator Call is for investigators and research … FICUS proposal.   Competitive projects will provide pilot data to assess feasibility of a novel approach or form the … of Intent are not required. Applicants may submit up to two proposals per year (but may be listed as co-PI on an …

… schedule for a while. Moving forward, I’m hoping to get a new one out every two weeks. This time, we’ve got a great interview with Ben … so everybody, readers of the library, can come to our databases and look for the specific information they are … from their core chemical structure: one “ene” – that’s two carbons attached by a double bond – and to “ynes” – two …

… Europe. So if there are any kind of dated references to the news, that’s why. But it was a really fun conversation. And … gene classes I could start on. So… but you started with two genomes, right? DAN UDWARY: Right. NADINE ZIEMERT: And … much I actually can learn just by really digging into the data and understanding what’s going on there. And now, …

… center and a lot of the really important recent events in data analysis and secondary metabolism over the last decade … he tells us about forthcoming efforts in paired-omics data sets and seeking to interpret function from BGCs. It’s a … better to do it together, to join forces instead of to make two competing tools. If we had known about your tool, Dan, …

… natural products for agriculture, and his upcoming new role as the Society for Industrial Microbiology and … on the way – I’m going to try to keep them coming out every two weeks for a while – so I hope you’ll be listening. But … heard me speak recently have heard me talk about the new data portal that we’re building. And I’ve been eager to …

… be proposing a larger project that requires the work of two or more DOE user science facilities. That’s kind of out … algal genomes, a lot of effort goes into generating these data sets. There’s a lot of manual work in terms of the annotate, … Links: The main page for information about CSPs JGI’s Data Release Policy A statement on DOE Mission relevance If …

… Our research focuses on the assembly of metagenomic sequence data into microbial genomes, which is of fundamental value … colleagues, to quantify heavy isotope incorporation into DNA by active microbial populations (Hungate et al. 2015). … As ANI provides a measure of genomic similarity between two genomes,  we use it to identify and classify bacteria …

… Read more about our data management practices and the resources we provide. … Read our research integrity and data code of conduct. … Data Management at the JGI …

… now, just because of the ways that we can generate data. So, obviously, it’s very apparent to us here at the … known things that were out there and created some good rule sets and put it all together in one package so that it … lots of stuff. On average, we had something– I think we had two biosynthetic clusters per MAG, which is pretty good …

… I’m interested in the world of natural products is also twofold but for different reasons to learn about how nature … so starting from some of the enzymes that we had the most data on and knew the most about, working with my … who’s also at the University of Michigan and a really talented graduate student, Chad, he predicted that …

… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, … cycle times from sample receipt to completion of standard analysis.  Raw data is provided for all sequencing products below. In … Draft quality microbial assembly of short-read sequence data, many unordered contigs. Assembly, annotation ( IMG ) …