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Genome Insider
… understand — and harness — the superpowers encoded in plants, fungi, microalgae, environmental viruses, and …
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Products
… metabolites and unidentified features in spectra. 167/214 Metagenome Metatranscriptome Environmental transcript sequence Assembly, annotation ( IMG/M ), mapping 273/273 Metagenome Cell Enrichments Obtained by physical separation of … Assembly, annotation ( IMG/M ) Depends on project Metagenome Minimal Draft Low-coverage short-read assembly & …
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User Advisory Committees
… management and strategic objectives of the microbial and metagenome programs. The committee serves as the program's key …
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Ancient Algae Reveal Secrets of Plant Evolution
Research uncovers the genetic foundations that helped plants conquer land over 600 million years ago. The Science By studying the genes of land plants’ closest algal relative,  Zygnematophyceae , scientists have enhanced our understanding of how early plants transitioned from water to land. Key gene groups …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… allow that to bind. Your receptor also typically has some tag so that you can then pull down the receptor with that …
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Contrasting Life Strategies of Viruses that Infect Photo- and Heterotrophic Bacteria, as Revealed by Viral Tagging
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… the shared genetic toolkit of ancestral and present-day plants The Science In a recent  Nature Genetics paper , … strategies used by liverwort are also seen in flowering plants, or angiosperms, suggesting they are evolutionarily … transferred — contributed to the ecological resistance of plants to the Earth’s ever-changing harsh habitats, thus …
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Filling in the Plant Tree of Life
What if we understood plants and how they adapt to their ever-changing …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… acid metabolism, or CAM — that’s C-A-M, for short — helps plants that have it lose less water in a hot, dry environment. Figuring out how plants evolved to deal with hot and dry conditions could help us to one day develop plants that are more drought-tolerant. These kinds of …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… in order to challenge or kill off competition, right? And plants do the same sorts of things. And then, bacteria often … if an order is uncultured (blue; represented only by metagenome-assembled genomes or MAGs) or cultured (gray; … and archaeal genomes that were created – these are Metagenome Associated Genomes, or MAGs. So these are genomes …
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A Collaboration to Improve Plant Genome Annotations Across Species
Biotechnology, which specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha … time or under specific conditions – in over a dozen plants. To learn more about the project, HudsonAlpha’s … protocols that permit gene expression analysis across plants and add additional experimentally derived biological …
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JGI@25: Using Team Science to Build Communities Around Data
… for an encyclopedia of reference genomes for fungal metagenomics. Two more CSP proposals came in 2016 that would … or C-fern — came out in the September issue of Nature Plants . C-fern has a genome approximately three times the … project is its focus on wild species as opposed to crop plants. Because crop plants have been manipulated over time …
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