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Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) … metabolites and unidentified features in spectra. 167/214 Metagenome Metatranscriptome Environmental transcript sequence … contigs. Assembly, annotation ( IMG ) Depends on project Plant and Algal Standard Draft Whole genome shotgun …

… listed on the “info” page for that organism on the Genome Portal . … You can view the status of all public … IMG (citation: https://doi.org/10.1093/nar/gkaa939 ) Metagenomes and Single Cells: IMG/M   (citation: … Phycocosm (citation: https://doi.org/10.1093/nar/gkaa898 ) Plants: Phytozome (citation: …

Plants are complex organisms that harbor a fantastic … contribute to a dynamic ecosystem. We are interested in how plants self-organize, influence, and are influenced by … patterns in root cross-sections. … 10.1038/s41579-020-0381-4 10.1038/s41396-020-0637-z 10.1038/s41477-024-01666-3 …

… atmospheric gas mitigation properties of multiple rice plant growth promotion technologies using methanotrophs. … … help drive discoveries that will render new economic advantages for farmers concerned with improving sustainable soil … technology called chassis-independent recombinase-assisted genome engineering (CRAGE), which offers single-step genomic …

… to meet the ever-changing demands of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to all …

… assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators and JGI … Proposal DOIs can be found at the top of the proposal info page on the JGI Genome Portal. You can navigate to the … for your proposal using your proposal's WIP ID (ex. 503582). Click on the correct proposal name on your search …

… “Adopt a Genome” is an informal program for faculty to “claim” the … Adopt-a-Genome has:  11 CSU educators working with the JGI 120 genomes claimed (or about one per student) Seven … some of the latest developments in microbial genomics, metagenomics, and computational biology, and to empower them …

Genome Insider is a podcast that showcases the work of JGI … understand — and harness — the superpowers encoded in plants, fungi, microalgae, environmental viruses, and …

… driven prioritization lists for laboratory isolation and genome sequencing of underexplored bacterial and archaeal … and archaeal lineages to improve phylogenetic analysis, metagenomic annotations, and function distribution. These are … capability of microbial communities based on their metagenome sequence, in the context of reference isolate …

… bound to it and maybe there will be some a affinity tag or a fluorescent tag, and so you can use that as a … And it actually was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that … DAN: Almost like you know that there is. AARON PURI: It’s a planted question Dan. Yeah. So overall I think what we’re …

Genomics group . Research Team … Coclet, C. and Roux, S. (2021) Global overview and major challenges of host prediction … al. (2019) Minimum Information about an Uncultivated Virus Genome (MIUViG).  Nature Biotech .  37 , 29–37 Roux S, et …

Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … episode, we talked about genome mining through some metagenome associated genomes. And yes, antiSMASH is … called “disease suppression”, where the microbiome of a plant, so the bacteria living on and inside the roots are …