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Natural Prodcast Episode 23: Aaron Puri
… bound to it and maybe there will be some a affinity tag or a fluorescent tag, and so you can use that as a readout of activity. And I … acyl-homoserine lactone signal . mBio. 2023 Aug 31;14(4):e0101023. doi: 10.1128/mbio.01010-23. Publication: Cummings DA …
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Natural Prodcast Episode 15: Katherine Duncan
… goal to have 1,000 women in the program over a span of 10 years. So typically about 80 to 100 women get selected … exciting. And why chemistry is so far behind in that stage is it’s still really difficult to do natural products … It’s them that do it. They created the Wiki. They edit the pages. They add the content. They run the Twitter account. …
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Natural Prodcast Episode 16: Marcy Balunas
… so there are– I hesitate to make a guess but maybe 50 to 100 different strains and they are in individual tubules.  … That is one of the really big frontiers for the next stage of natural product drug discovery I think. Or even … computational skills among biologists JGI CSP Proposal: Metagenomic mining of natural product diversity and …
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Publication Policy
Proposal DOIs can be found at the top of the proposal info page on the JGI Genome Portal. You can navigate to the proposal info page using any of the below methods: Search the Genome … Click on the correct proposal name on your search results page to navigate to the proposal info page. Use a URL …
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Micro-Scale Applications Group
… offers the first quantitative Stable Isotope Probing (SIP) Metagenomics pipeline that utilizes internal analytical … various microscopy techniques … Stable isotope probing metagenomics: … Single cell: … For further details, please …
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Natural Prodcast Episode 5: Brad Moore
… marine natural product biosynthesis and at the beginning stages of connecting molecules and genes. And then genomics … pairs. It was not linear, like Streptomyces , but circular. 10% of the genome encoded natural product pathways. Dan: … Patrick would spend time between our two laboratories doing metagenomics, some genomics. We were a little concerned …
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Natural Prodcast Episode 14: Nigel Mouncey
… had a high throughput screening platform where we’d look at 10,000, 15,000, 20,000 mutants a week. We started doing a … in an obvious way. NIGEL MOUNCEY: We did a little bit of metagenome screening work and did find related clusters. But … 30 to September 1st. The link is found all over JGI’s web pages.  DAN: And I will put it in the show notes along with …
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Natural Prodcast Episode 17: Cassandra Quave
… of ground – her book, bioprospecting vs biopiracy, early stage drug discovery in general, and a possible data-driven … has a book called The Plant Hunter and I’ve read all 400 pages of her life and I feel like I have a new friend that … these studies are lacking that. And so there’s no way to be 100% sure that the chemistry that they’re even reporting on …
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Special Initiatives & Programs
… for BERSS. For DNA synthesis requests, the minimum is 100 kb, and for metabolomics, at least 22 samples are … the refining of new technology (e.g., single-cell genomics; metagenomics, etc.).   The faculty-level scientist must be …
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Disclaimer
JGI is not responsible for the contents of any off-site pages referenced. … Disclaimer of Liability … Disclaimer of …
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10 From JGI on the 2019 Highly Cited Researchers List
… 2019 list of Highly Cited Researchers , which includes 10 affiliated with the JGI . The 2019 list focused on Highly … team established community gardens of switchgrass plants in 10 different field sites on a north-south gradient across …
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Products
… vector of choice Glycerol stock of sequence verified clone 102/NA DNA Synthesis Constructs 5-10kb in size Single gene … metabolites and unidentified features in spectra. 167/214 Metagenome Metatranscriptome Environmental transcript sequence Assembly, annotation ( IMG/M ), mapping 273/273 Metagenome Cell Enrichments Obtained by physical separation of …
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