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… if an order is uncultured (blue; represented only by metagenome-assembled genomes or MAGs) or cultured (gray; … and archaeal genomes that were created – these are Metagenome Associated Genomes, or MAGs. So these are genomes that were assembled from metagenomic sequence, metagenomic sequence being taking a …

… that easily can identify secondary metabolite pathways in metagenomes, which is still hard to do. We are mining a lot of … of secondary metabolite pathways as viewed through metagenome studies, and what more JGI and others can do to …

… genomes are critical to serve as phylogenetic anchors for metagenomes studies.  While uncovering the metabolic potential … Giant virus diversity and host interactions through global metagenomics.” Nature 578(7795): 432-436 (2020). Seshadri R., …

That is one of the really big frontiers for the next stage of natural product drug discovery I think. Or even … computational skills among biologists JGI CSP Proposal: Metagenomic mining of natural product diversity and …

… metabolites and unidentified features in spectra. 167/214 Metagenome Metatranscriptome Environmental transcript sequence Assembly, annotation ( IMG/M ), mapping 273/273 Metagenome Cell Enrichments Obtained by physical separation of … Assembly, annotation ( IMG/M ) Depends on project Metagenome Minimal Draft Low-coverage short-read assembly & …

… to pursue her research interests in microbial ecology and metagenomics. Her current research focuses on leveraging thousands of metagenomic datasets from host-associated and environmental …

… is offering a five-day workshop on Microbial Genomics and Metagenomics. Details: mgm.jgi.doe.gov   This highly …

… mentor students, teaching classes, and really setting the stage for what I really wanted to do and getting to– so I … rest of the archaea and fungal genomes and then work on metagenomes. So yeah. So we’ve taken every public sequence … it’s a very long process in order to go from the first stage of discovery to a molecule that’s actually helping …

… marine natural product biosynthesis and at the beginning stages of connecting molecules and genes. And then genomics … Patrick would spend time between our two laboratories doing metagenomics, some genomics. We were a little concerned …

… not essential for fundamental growth, provide critical advantages to the organisms producing them, and are often …