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Who We Are
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at Lawrence Berkeley National Laboratory. The JGI consists of 225 researchers and support staff in the … to large-scale datasets and analysis tools for genomes, metagenomes, and metabolomics through its data portals. …
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User Programs
… For accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds.  … Large Scale CSP New Investigator CSP Functional Genomics JGI-TMF Critical Minerals and Materials Status CLOSED CLOSED …
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Offerings & Capabilities
… The central mission of the JGI’s Genomic Technologies department is   ensuring users … overarching categories: DNA Sequencing , Biodesign and Metabolomics .  Many users rely on a multifaceted … amenable to statistical analysis. To meet these needs, the JGI deploys state-of-the-art sequencers and platforms …
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Products
… The JGI has diverse capabilities in: DNA and RNA sequencing, … Biodesign and pathway engineering Mass spectrometry based metabolomics Below is a table of standard product offerings, … is provided for all sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the …
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Data Policy
… the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data Policy. It is our … of data to support their use by those generating data. The JGI Data Policy applies to research data and analysis … : A period in which data is not publicly available in JGI systems or outside repositories. Full access is granted …
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JGI-TMF Critical Minerals and Materials Call
… materials. For accepted proposals, sequencing, synthesis, metabolomics and analysis will be provided for free to the PI by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. All JGI data is made publicly available in accordance with the …
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Frequently Asked Questions: Project Management
… Harmon-Smith DNA Synthesis projects: Miranda Harmon-Smith Metabolomics projects: Christa Pennacchio   … The majority of JGI projects come from the user community. Find out about JGI’s calls for proposals , and submit your proposal online … The “User” signing the JGI User Agreement will be an authorized representative from …
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Community Science Program
… with access to high-throughput sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  … call is for expansive projects that leverage a range of JGI capabilities, and also requires a Letter of Intent. The … All proposals first undergo technical review by JGI staff, while the DOE ensures that they meet DOE mission …
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Publication Policy
… of this policy is to establish communication norms around JGI contributions, ensure that all contributors to a … of the journal in which the research is published. The JGI expects that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce …
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Mission
… JGI Mission As a U.S. Department of Energy Office of Science … drive biotechnology and biomanufacturing innovation. The JGI contributes to this mission by enabling large-scale … resilience across critical sectors: Energy and bioproducts: JGI user research advances understanding of biological …
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Frequently Asked Questions: Proposal Submission
… go to the proposal submission page , login using your JGI account (create one here if you don’t already have an … applicants from any institution type and at any career stage. Generally, most users are able to work with Berkeley … or longer to obtain with no guarantee of approval.    JGI staff are not eligible to submit proposals, or to be …
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Sequencing Technologies & Products
… Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust offering of sequencing … with Science Programs and Operations teams to enable the JGI’s focus on expanding molecular capabilities and … sequence applications, single cell genomics, biodesign, and metabolomics capabilities.    Overview of sequencing …
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