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… Yu et al, APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2004, 1253–1262, 70:3 ALISON TAKEMURA: And so did you succeed in … of Biosynthetic Clusters , which is a subsection of the IMG data portal , which is a larger portal for microbial … and archaeal genomes that were created – these are Metagenome Associated Genomes, or MAGs. So these are genomes …

… execution by: Verifying metadata and coordinating with IMG , GOLD and others for data annotation and submission …

… and virus genomes have been assembled and reported from metagenomes, our understanding of the impacts of these viruses … this question in natural soil ecosystems by combining metagenomics with other omics approaches, including especially … Multiomics approaches such as metagenomics and metatranscriptomics provide invaluable …

… U.S. Department of Energy under Contract No. DE-AC02-05CH11231. Accordingly, the U.S. Government retains a nonexclusive, … The JGI is not responsible for the contents of any off-site pages referenced. …

… JGI Genome/Data Portal, MycoCosm, PhycoCosom, Phytozome, or IMG) and outside repositories (e.g. NCBI SRA or GenBank; … repositories),  (2) PI request to list data publicly, (3) at the end of the embargo period. If data or analyses of … for which JGI has not yet received samples as of Sep 30, 2021 are subject to a 2-year embargo to maintain the …

… co-leading the on-trip science program for Homeward Bound 3. And I currently co-leading the science program for the … exciting. And why chemistry is so far behind in that stage is it’s still really difficult to do natural products … It’s them that do it. They created the Wiki. They edit the pages. They add the content. They run the Twitter account. …

… that I was exchanging with people. So I think I wrote 3,000 emails in the course of one and a half year while … of biosynthetic gene clusters. But with all of the other IMG kind of hooks into IMG’s data. IMG being Integrated … episode, we talked about genome mining through some metagenome associated genomes. And yes, antiSMASH is …

… that the JGI’s Annual User Meeting is coming up, August 30th through September 1st. Three days of great science, and … in an obvious way. NIGEL MOUNCEY: We did a little bit of metagenome screening work and did find related clusters. But … 30 to September 1st. The link is found all over JGI’s web pages.  DAN: And I will put it in the show notes along with …

… all these 120 genomes, and each of them have– I don’t know– 30 gene clusters or so. So I think I spent two years only … that easily can identify secondary metabolite pathways in metagenomes, which is still hard to do. We are mining a lot of … in the past, we’ve had these monolithic databases, NCBI and IMG , that have a lot of data and really useful data, really …