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… found in Yu et al, APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2004, 1253–1262, 70:3 ALISON TAKEMURA: And so did you … of Biosynthetic Clusters , which is a subsection of the IMG data portal , which is a larger portal for microbial … and archaeal genomes that were created – these are Metagenome Associated Genomes, or MAGs. So these are genomes …

… and virus genomes have been assembled and reported from metagenomes, our understanding of the impacts of these viruses … this question in natural soil ecosystems by combining metagenomics with other omics approaches, including especially … Multiomics approaches such as metagenomics and metatranscriptomics provide invaluable …

… Notice Effective July 27, 2026, the JGI will move to a new login service, requiring … execution by: Verifying metadata and coordinating with IMG , GOLD and others for data annotation and submission …

… of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231. Accordingly, the U.S. Government retains a … The JGI is not responsible for the contents of any off-site pages referenced. …

… this policy) produced through all user projects accepted FY22 and later through the Community Science Program (CSP), … JGI Genome/Data Portal, MycoCosm, PhycoCosom, Phytozome, or IMG) and outside repositories (e.g. NCBI SRA or GenBank; GNPS2) as described in the  product offerings and are …

… inside them. And this was, I think it must’ve been about 2001, maybe, and so it was before smartphones and before … exciting. And why chemistry is so far behind in that stage is it’s still really difficult to do natural products … It’s them that do it. They created the Wiki. They edit the pages. They add the content. They run the Twitter account. …

… to tell a quick story. Looking back, the year was probably 2010, 2011, I was a, uh- actually, I’ve got the t-shirt on … of biosynthetic gene clusters. But with all of the other IMG kind of hooks into IMG’s data. IMG being Integrated … episode, we talked about genome mining through some metagenome associated genomes. And yes, antiSMASH is …

… screening platform where we’d look at 10,000, 15,000, 20,000 mutants a week. We started doing a whole bunch of … in an obvious way. NIGEL MOUNCEY: We did a little bit of metagenome screening work and did find related clusters. But … 30 to September 1st. The link is found all over JGI’s web pages.  DAN: And I will put it in the show notes along with …

… secondary metabolism. Welcome back. This will be episode 12 of Natural Prodcast. And it’s our conversation with Nadine … that easily can identify secondary metabolite pathways in metagenomes, which is still hard to do. We are mining a lot of … in the past, we’ve had these monolithic databases, NCBI and IMG , that have a lot of data and really useful data, really …