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Natural Prodcast Episode 23: Aaron Puri
… bound to it and maybe there will be some a affinity tag or a fluorescent tag, and so you can use that as a readout of activity. And I … was like a nice summer day in Seattle I think this was like 2013 or 2014. And antiSMASH — I know you’ve interviewed …
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Natural Prodcast Episode 17: Cassandra Quave
… of ground – her book, bioprospecting vs biopiracy, early stage drug discovery in general, and a possible data-driven … has a book called The Plant Hunter and I’ve read all 400 pages of her life and I feel like I have a new friend that … the convention went– since the protocol went into force in 2014. There’s now a website that has a lot of resources that …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… systems determine mutualism or parasitism between some archaeal hosts and their hitchhikers. The Science Within the … symbiotic interactions are difficult to study in the lab. Metagenomics provides new views of these relationships.  … Frontiers Group, the National Science Foundation (MCB-1244557 to J.A.D.) and the Lawrence Berkeley National …
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The Expanding Universe of Methane Metabolisms in Archaea
Metagenome-assembled archaeal genomes provide new insights into an ancient metabolism. Methane is a greenhouse gas 20 times more potent than carbon dioxide. Billions of years … Office of Science User Facility, for publicly available metagenome data provided by the other study co-authors, and …
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Disclaimer
… of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231. Accordingly, the U.S. Government retains a … JGI is not responsible for the contents of any off-site pages referenced. … Disclaimer of Liability … Disclaimer of …
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Mission
… scientific approaches to these challenges.     Our homepage video includes external footage from:  University of Delaware Laura.Selbmann©PNRA. All … environmental mission objectives. Fungi, algae, bacteria, archaea, viruses, and microbial communities of interest to …
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Natural Prodcast Episode 2: The Primer, Part 2
… to the second episode of the Natural Prodcast. This is part 2 of our “primer” episode, so if you ended up here somehow … from fungi, and Taxol from plants. Plants, fungi, bacteria, archaea, they all have secondary metabolism. They all have … maybe obvious or notable. We are still in – not an early stage. I think we can identify most secondary metabolism …
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Primer and platform effects on 16S rRNA tag sequencing
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… these gaps of knowledge. In a study published November 11, 2022, in Cell Genomics , the team focused on Actinobacteria … generated as part of Genomic Encyclopedia of Bacteria and Archaea (GEBA) initiative. “This project has helped to … the JGI has pioneered, including single-cell genomics and metagenomics. The GEBA initiative has also utilized a very …
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Natural Prodcast Episode 15: Katherine Duncan
… inside them. And this was, I think it must’ve been about 2001, maybe, and so it was before smartphones and before … exciting. And why chemistry is so far behind in that stage is it’s still really difficult to do natural products … It’s them that do it. They created the Wiki. They edit the pages. They add the content. They run the Twitter account. …
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Targeted diversity generation by intraterrestrial archaea and archaeal viruses
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Natural Prodcast Episode 14: Nigel Mouncey
… screening platform where we’d look at 10,000, 15,000, 20,000 mutants a week. We started doing a whole bunch of … in an obvious way. NIGEL MOUNCEY: We did a little bit of metagenome screening work and did find related clusters. But … 30 to September 1st. The link is found all over JGI’s web pages.  DAN: And I will put it in the show notes along with …
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