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… like, and then you could characterize it. The classical study that demonstrated this is Challis et al, Chemistry and … if an order is uncultured (blue; represented only by metagenome-assembled genomes or MAGs) or cultured (gray; … 2016 overview of genome mining (open access) The Challis/Corre chemistry-focused review of early genome mining …

… is chartered to offer advice, guidance and counsel on the effective management and strategic objectives of the microbial and metagenome programs and report back to them. The Committee … is chartered to render advice, guidance, and counsel on the effective management and strategic objectives of the …

PMO works with users, JGI scientists and technical staff to onboard users and guide them through the process of working … launching the user’s project. See below for details on each step. … Please review our FAQ in advance of contacting the PMO office.  … Before work can start on any …

Facility, the JGI plays a leadership role in enabling the frontiers of research related to DOE’s missions in bioenergy, carbon cycling and biogeochemistry. In … the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, Secondary Metabolites, and DNA …

… in: DNA and RNA sequencing, Sample and library preparation, DNA synthesis and pathway engineering Mass spectrometry … metabolites and unidentified features in spectra. 167/214 Metagenome Metatranscriptome Environmental transcript … sequence Assembly, annotation ( IMG/M ), mapping 273/273 Metagenome Cell Enrichments Obtained by physical separation …

So like, as an undergraduate, I was like, no, I’m going to study architecture. I like making things and designing … genes be up-regulated. So, there are now ways that we can correlate environmental signals back to active transcription. … the end of last year. Dan: So these are going to be seaweed metagenomes? You’re sequencing everything? Brad: Metagenomes …

Jonathan’s email request reached  Emiley Eloe-Fadrosh , the Metagenome Program Head at the  U.S. Department of Energy … do an environmental microbial community (metagenomic) soil study in an untouched region of the Everglades, the … .  Lastly, for this project the students calculated the correlations between the integral biomarkers and abiotic …

JGI Mission As a U.S. Department of Energy Office of Science user facility supported by the Biological and Environmental Research program, the Joint Genome Institute … advanced genomic capabilities, large-scale data and professional expertise to support the global research community in …

Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify … computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … Clum, A. et al. (2021)  DOE JGI metagenome workflow …

Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic … genomes are critical to serve as phylogenetic anchors for metagenomes studies.  While uncovering the metabolic … information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea. …

… that for this interview Alison was not available, but no worries, she’ll back next time! We’ve already got lots of … And these were not in natural products, these were in studying regulatory mechanisms of, first, E. coli and then … in an obvious way. NIGEL MOUNCEY: We did a little bit of metagenome screening work and did find related clusters. But …

Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Welcome back to Natural Prodcast! … are afraid of fungi?    DAN: I think yes, I think that’s correct. I mean, you know, my experience with Aspergillus was … this, is that I don’t have an awareness of how to go about studying them. Like to me, fungi are, you know, how do you …