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How to Submit Sequencing Samples
… Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing sample-level … quantity and quality has been the rate-limiting step for many projects at the JGI. The quality of the starting …
Learn more
FICUS
… The Facilities Integrating Collaborations for User Science (FICUS) call represents a unique … completed on an accelerated timeline as compared with the standard CSP projects. In addition, they must utilize a … Proposals for the annual FICUS call with EMSL begin with a Letter of …
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User Support Analysis Group
… User Support Analysis group provides computational analysis for new technology development and JGI user science … for diverse experiment types, with main focus areas being genome variation, transcriptomics and epigenomics. Our work … to the development of automated analysis pipelines for standard sequencing products performed at scale. Our group …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… The Joint Genome Institute and the Molecular Foundry have launched a … proposal call . This represents a unique opportunity for researchers to request the capabilities and expertise of both national user facilities in one research proposal.  Submit … living, local transportation, and travel costs. The cost of standard incidentals related to the user project (such as …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… Mexico, and an incredibly bright guy who’s been thinking for a long time about the evolution and natural products … to secondary metabolism. And when we were talking about definitions around words I made a possibly false statement. … described it, I thought of primary metabolism as being the standard set of shared reactions that most living organisms …
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DNA Synthesis Program
… of biofuels, biochemicals and other bioenergy solutions.  The program has been a pioneering effort in functional genomics since 2012, with a focus on … by synthesizing genes, pathways, and whole chromosomes for bioenergy and bioproduct applications. The program has …
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Microbial Program
… The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse … inter-organismal interactions. These insights are crucial for addressing key environmental challenges, such as … and inter-organismal interactions, which are critical for advancing sustainable solutions in agriculture, energy …
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Frequently Asked Questions: Proposal Submission
… See below for a list of Frequently Asked Questions about our proposal submission process. You can review successful letters of intent and … Review the list of open calls ; click on the call link to see specific details including project … Many of the submissions are done using web-based forms.   To view the proposal templates, go to the proposal …
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CSP Functional Genomics
… The CSP Functional Genomics call is to enable users to perform … ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily achievable … All proposals will be externally peer-reviewed for scientific merit, DOE mission relevance , proposed data …
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Special Initiatives & Programs
… sequencing, synthesis, and targeted metabolomics support for DOE-BER funded awards, including awards funded through  … Early Career Research Program .   If “BERSS” is not mentioned in the BER funding call, proposals are NOT eligible for BERSS support through the JGI (with the exceptions of …
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Natural Prodcast Episode 7: Ben Shen
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … of secondary metabolism.  DAN: Hello, and welcome back for Episode 7 of the Natural Prodcast. It’s been about a … And in DNA is all that the same molecule, just different sequences BEN: The other thing I think about JGI is, really, …
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JGI Portals
… new algorithms, models and tools in support of DOE mission priorities. Data discoverability and accessibility are critical requirements for amplifying the JGI’s impact. Data generated from a single investment will be reused for further science.  Notice Effective July 27, 2026, the …
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