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Natural Prodcast Episode 10: A Primer on Genome Mining
… about natural products and the science and scientists of secondary metabolism. Welcome back for our second season of … more than 50,000 genomes that we derived from meta-genome sequences. As always, you’ll find transcripts and show notes … wise maybe, what genome mining is, then, is looking at DNA sequence and trying to find the things that you want to …
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Microbial Program
… The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse … biogeochemical cycling and inter-organismal interactions. These insights are crucial for addressing key … The Microbial Program focuses on using advanced sequencing technologies to explore …
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Natural Prodcast Episode 20: Brian Bachmann
… DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. … And at the time, it was really exciting when people would sequence [DNA]. The genome was– well, that hadn’t really … the meantime then, while we were in graduate school, then Frances Arnold’s papers came out, directed evolution, and …
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Biodesign
… Platform capabilities support researchers exploring how to convert sequence into functional assessments. This is done by synthesizing genes, … BOOST provides a suite of tools to automate sequence design for assembly by Gibson, Yeast recombination and Golden Gate methods …
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Genome sequence of the palaeopolyploid soybean
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Special Initiatives & Programs
… Early Career Research Program .   If “BERSS” is not mentioned in the BER funding call, proposals are NOT eligible for BERSS support through the JGI (with the exceptions of DE-FOA-0003453 and DE-FOA-0003615 , which are both … capabilities and products . A minimum request of 1 Tb of sequence data is required to qualify for BERSS. For DNA …
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Natural Prodcast Episode 18: A CSP Primer
… round of episodes. If you stick around for the next few months, you’re going to hear my last interview with my … at JGI start with sequencing, but where else did those sequences go? Like, what are the other scientific tools we … And we consider these capabilities a little bit more from sequence to function since we can start to tackle more …
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Natural Prodcast Episode 12: Nadine Ziemert
… about natural products and the science and scientists of secondary metabolism. Welcome back. This will be episode 12 of … it would work, but we actually found fosmids. And we sequenced the whole fosmid at the time with Sanger … how hard it is, actually, at the end to get the compound expressed in a heterologous host strain. DAN UDWARY: Yeah, …
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Data Policy
… are subject to the following Data Policy. It is our mission to support open data and information sharing. We also recognize the need to have a limited and time-sensitive protection of certain types of data to support their use by those … to as “data users”) cannot see this data. Use-Restriction : A period in which data is publicly visible and …
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Natural Prodcast Episode 6: Marc Chevrette
… Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hi again, and welcome to Episode 6 … at genomes and seeing where the really hard things to sequence were, and wondering what those … what those were … it about secondary metabolite pathways that are so hard to sequence? MARC: This isn’t true of all of them, but for …
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Natural Prodcast Episode 8: Eric Schmidt
… Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there and welcome back for … like a million more questions for him, but we were a little pressed for time on this interview, so I’m hoping we can … turns a peptide, for example, from a disordered sequence into an antibiotic that kills bacteria through a …
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Natural Prodcast Episode 22: Alison Narayan
… DAN UDWARY: Hey everyone. Welcome back to Natural Prodcast. This continues the … association that might help? Like, if you have an unknown sequence or new flavin monooxygenases, you could say, oh Alison sequenced all of these, she tried this, if you have this …
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