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… Dr. Roux joined the JGI in 2017 to lead viral genomics research … host(s), collaboration with JGI users for analyzing viral datasets, and the organization of community-building efforts … in the field of viral ecogenomics. For this role, Dr. Roux can rely on more than 10 years of expertise in the …

… This week, Alison and I talk to Roger Linington, from Simon Fraser University in British Columbia, Canada. This is … or NPAtlas, a freely accessible natural products structure database, which is going to be just invaluable to the … hotel chair now is Roger Linington. Roger is a professor at Simon Fraser University. And I have known Roger for quite a …

… as the DOE Systems Biology Knowledgebase and the National Microbiome Data Collective.    … other relevant organisms. We provide access to large-scale datasets and analysis tools for genomes, metagenomes, and metabolomics through its data portals. Supported by the DOE Office of Science's …

… like the JGI, through its Genesis Mission. Launched in 2025, the initiative aims to accelerate scientific … ensure U.S. energy dominance by integrating supercomputers, datasets and AI agents to solve key national challenges. The … high-value partnerships among members that catalyze data flows and promote novel data applications. As a …

… of samples for sequencing, or the submission of sequencing data for synthesis. This agreement, required by the DOE for … others: indemnification, patent rights, rights in technical data, project reporting to the DOE, and publication … NOTE:  If a PI changes academic institutions or a new PI is named during the performance period, your Project Manager …

… high value to establish models and hypotheses, experimental data is critical to further test such hypotheses. In … Schulz F., Roux S., Paez-Espino D., Jungbluth S., Walsh D. A., Denef V. … N. N., Kelly W. J. Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection.” Nat …

… and synthetic biology. But also the metagenomics and gut microbiome, as I think that it’s like a perfect storm in … active compound discovery. For this Fleming won the Nobel Prize in the 40s. Then Samuel Waxman taught us the isolation … so everybody, readers of the library, can come to our databases and look for the specific information they are …

… published. The JGI has a strong interest in seeing that the data produced by the facility result in scientific … below) for the generation of sequence or metabolomic data, DNA synthesized, and any other contributions, such as … and JGI together aim to publish the first analysis of data produced at the facility, provided this is done in a …

… molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, … of high performance plants and microbes, and understanding microbiome interactions. The  insights derived are crucial … program integrates cutting-edge metabolomics with genomic data to gain insights into how small molecules function …

… The JGI’s data stewardship expertise and infrastructure enable a broad community of scientists and engineers to leverage our data to develop new algorithms, models and tools in support of DOE mission priorities. Data discoverability and accessibility are critical …

… then be used to submit proposals, sample and project metadata, and to access JGI tools and systems. … The Project Overview report includes project-level metadata such as the project name, current status, NCBI & JGI taxonomy, and data locations on the various JGI Portals. The Sample report …

… begin, and all CSP proposals are subject to JGI policies on Data Release and Publication .   Except for applicants to … The deliverables can range from raw sequence data to well-annotated assembled genomes to synthesized DNA constructs to metabolomics data, depending on the specific product types covered in the …