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Natural Prodcast Episode 20: Brian Bachmann
… and using engineered biosynthetic pathways and enzyme systems to do synthetic analoging of some really complex … Yeah, I went to a SIMB meeting, Society for Industrial Microbiology meeting and– DAN UDWARY: Which is where we are … over that when we move into new chemical ecologies, new ecosystems, we find new chemistry. It worked in the marine …
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Partnerships: Myco-Ed
… consists of coordinated hands-on experiments across fungal biology teaching labs. The purpose of the program is to: … and potential applications. … The Department of Energy Systems Biology Knowledgebase (KBase) is involved in the … scalable computing infrastructure to perform sophisticated systems biology analyses. The platform is a freely available …
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Cataloging the Microbes that Manage the Health of River Systems
… to the community level. The Impact Rivers are transport systems, and their health is heavily reliant on the energy … predictive watershed scale models to manage river ecosystems. One application for the information is the … to study river microbiomes. To understand the microbiology of watershed systems, they utilized over 160 river …
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Special Initiatives & Programs
… (iSEE) and the Carl R. Woese Institute for Genomic Biology (IGB), and it will include 17 partner institutions. …
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Natural Prodcast Episode 15: Katherine Duncan
… to do my PhD, I thought, right, I’m going to learn microbiology. So I went to– this was in 2008 by then. And I’ve never done– I mean, I think I did maybe a couple biology classes in undergrad, but my PhD was an … And as a result, there’s been a lot of work on open pond systems and infrastructure and growing microalgae. And to …
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Metabolomics
… of the role small molecules play in diverse biological systems, sheds light on nutrient cycling, and leads to the …
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Sequencing Submission Requirements for DNA Synthesis
… should be emailed to  Miranda Harmon-Smith, Synthetic Biology Project Manager . … How To Create an Annotated …
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Brachypodium: A monocot grass model system for plant biology
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User Programs
… projects that call for expansive sequencing, synthetic biology and metabolomics capabilities Investigators who have … by Letters of Intent. Proposals may include synthetic biology, sequencing and metabolomics. Proposals may include synthetic biology, transcriptomics, DAP-seq, and metabolomics. …
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Metagenome Program
… approaches to assess microbial activity across ecosystems.  By studying microbial communities and their … that could advance our understanding of Earth’s ecosystems. … The Metagenome Program focuses on the … the complex interactions and functions that shape ecosystems. By decoding the microbial DNA in natural …
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Bipartite graphs in systems biology and medicine: a survey of methods and applications
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Natural Prodcast Episode 9: Roger Linington
… my hotel room at SIMB, or the Society for Industrial Microbiology conference that took place in January this year in … has gone on, the more we’ve become interested in sort of systems level approaches. So rather than asking one question … and screening, structure elucidation, and chemical biology. In recent years, his group has turned to some …
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