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Natural Prodcast Episode 7: Ben Shen
… started collaborating with Ben and his group to work on sequencing, synthesis and genome mining technology to help … because – mainly it’s due to the emerging technology on DNA sequencing and synthetic biology. But also the metagenomics … with a unified language, but then you have to have an index. You have to have the computer-searching systems. So …
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DOE Metrics
… FY 2026 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours …     Q4 2026 175     2,208     *Includes Illumina and PacBio sequencing platforms. **Operating Hours target is based on … even though an individual may have several projects/roles. Sequencing Quarter Total Bases (Trillions) Operating Hours …
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Industry Engagement Program
… Industry Partners access to our vast set of resources:  JGI sequencing technologies include scaling technologies and … JGI users get access to cutting-edge capabilities including sequencing, synthesis and metabolomics. Many users rely on a …
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Community Science Program
… community at large with access to high-throughput sequencing, synthesis, and metabolomics at the JGI for … based on their DOE relevance.  For accepted proposals, sequencing, synthesis, metabolomics and analysis will be …
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Synthetic Biology Informatics Group
… provides a suite of tools to automate sequence design for assembly by Gibson, Yeast recombination and Golden Gate …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… really the same kind of thing. Before the age of genome sequencing, we had to basically break up the pieces of DNA … And you would scan those pieces by hybridization or maybe sequencing if you were rich enough. [CHUCKLES] And once you … often the things that suffer first when it comes to genome assembly. Some of the common biosynthetic systems – like a …
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Natural Prodcast Episode 17: Cassandra Quave
… things, because a lot of what we do at JGI in terms of the sequencing that we do is very people-disconnected, and … it across the community. So that’s been used in supporting educational initiatives and work with school children and … that has a good cytotoxicity profile, so a nice selectivity index, doesn’t necessarily mean it’s going to make a good …
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Environmental Genomics Group
… Our research focuses on the assembly of metagenomic sequence data into microbial … Oliver, T., Varghese, N., Roux, S. et al. Coassembly and binning of a twenty-year metagenomic …
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New Lineages of Life Group
… environmental samples. This work combines third generation sequencing and machine learning to enable fast, accurate … A read simulation tool for generating synthetic sequencing data from genomic sequences …
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Data Policy
… For sequencing or metabolomics projects: data are subject to a  … Sequencing and Metabolomics projects …
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Offerings & Capabilities
… by generating data in three overarching categories: DNA Sequencing , DNA Synthesis and Metabolomics .  Many users …
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Natural Prodcast Episode 11: Marnix Medema
… gene clusters. And I had heard the first rumors of people sequencing like these enormous numbers of genomes, like 20 … families across all genomes. And the acceleration of genome sequencing, especially in bacteria, has been enormous. There … clusters. And then they sequenced a really nice and good assembly. They were able to assemble a really high quality …
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