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Microbial Program
The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore … … The Microbial Program focuses on using advanced sequencing technologies to explore microbial diversity — … datasets, particularly for uncultivated microorganisms, by sequencing large populations of bacteria and archaea in …
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FICUS
… to DOE mission is appropriate. For accepted proposals, sequencing, synthesis, metabolomics and analysis will be …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… to grow. If you hear Nigel talk, he is very interested in sequencing a lot more natural product-heavy culture …
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Frequently Asked Questions: Proposal Submission
… eligible to submit proposals, or to be listed as co-PIs or collaborators.   JGI’s standard User Agreement must be … contact us in advance for advice. … For accepted proposals, sequencing, synthesis, metabolomics and analysis will be … Energy’s funding of the JGI. … No, the proposal is only for sequencing, metabolomics and/or synthesis effort at the JGI. …
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Natural Prodcast Episode 14: Nigel Mouncey
NIGEL MOUNCEY: Oh, sure. I think our legacy obviously is in sequencing.  DAN: Of course.  NIGEL MOUNCEY: Sequencing the wazoo out of anything that’s relevant to the … so it’s really functional genomics. And there’s a lot of sequencing based approaches, of course, now that we can use …
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Natural Prodcast Episode 11: Marnix Medema
… gene clusters. And I had heard the first rumors of people sequencing like these enormous numbers of genomes, like 20 … families across all genomes. And the acceleration of genome sequencing, especially in bacteria, has been enormous. There … Wageningen University in the Netherlands. Marnix and his collaborators have a fantastic set of software tools for …
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Partnerships: Myco-Ed
… resources empower students through isolation and genome sequencing of new fungal species.  Students collect fungi, … into iNaturalist. Myco-Ed has:  ~50 lineages selected for sequencing 16 genomes released 20 members from 15 … laboratories with minimal overhead (cost of media, ITS sequencing and tissue preparation), allowing participation …
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FICUS-NERSC/KBASE
… plan is written into a Statement of Work document. … For sequencing projects, once work is under way, raw sequence … in publication of results. … Submission … More on Sequencing Projects …
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Natural Prodcast Episode 20: Brian Bachmann
… which was a very early genome mining company, back when DNA sequencing of natural product pathways was hard and … it was a big deal. And you really had– I mean, the whole sequencing endeavor, had a cost, how much blood, sweat, and … are some papers mentioned in our conversation: Ecopia and collaborators’ landmark genome mining paper: “A …
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Special Initiatives & Programs
Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for … a core facility instead. Proposals may not exceed 10 Tbp sequencing, 500 kbp synthesis, and 200 polar/500 nonpolar … to expand on their DOE-BER funded work with additional sequencing, synthesis, or metabolomics should apply to one …
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Microbiome Data Science Team
… other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … (Nature 2019). Other projects in the group include the sequencing and comparative analysis of thousands of archaeal … et al. (2014) Genomic Encyclopedia of Bacteria and Archaea: Sequencing a Myriad of Type Strains. PLoS Biology …
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User Programs
For accepted proposals, sequencing, synthesis, metabolomics and analysis will be … with DOE mission-relevant projects that call for expansive sequencing, synthetic biology and metabolomics capabilities … Letters of Intent. Proposals may include synthetic biology, sequencing and metabolomics. Proposals may include synthetic …
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