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… a class of natural product with a really cool chemical structure. We try to explain it, but it’s chemistry, so I … there. So, check out the show notes, and I’ll put up some structures and link to some resources you can use to get … And in DNA is all that the same molecule, just different sequences BEN: The other thing I think about JGI is, really, …

… sends Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need help naming your …

… in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Joint Genome … datasets encompassing >150,000 isolate genomes, 230,000 metagenome-assembled genomes (MAGs), and 40,000+ metagenomes … so no programming knowledge and no dedicated compute infrastructure is required to perform computational analysis. …

… It is now available for both eukaryotic and microbial metagenome assemblies. It is also available as an app in …

… capability of microbial communities based on their metagenome sequence, in the context of reference isolate … of plasmids automatically identified from genomes, metagenomes, and metatranscriptomes. It provides rich data … of Uncultivated Viral Genomes, derived from genomes, metagenomes, and metatranscriptomes, with over 15 million …

… us about forthcoming efforts in paired-omics data sets and seeking to interpret function from BGCs. It’s a long, wide … cluster database, and a tool for predicting natural product structures from genomes. And I was writing grants furiously … primer episode, we talked about genome mining through some metagenome associated genomes. And yes, antiSMASH is …

… usually serve as dimers, and then they will bind to certain sequences of DNA. And when they bind to those certain … enzymes show a lot of similarity to them in the primary structure. However, the reaction that they perform is … we need a better understanding of that. We have a crystal structure, and we're working on getting crystals to …

… al. (2021) CheckV assesses the quality and completeness of metagenome-assembled viral genomes. Nature Biotechnol . … Science  356: 82-85 Ovchinnikov S. et al. (2017) Protein structure determination using metagenome sequence data. … al. (2015) Microbial species delineation using whole genome sequences. Nucleic Acids Res. 43(14):6761-71 Kyrpides NC et …

… the JGI has unique access to both expertise and infrastructure to facilitate these efforts. Particular areas of emphasis will be the development of tools and infrastructure for microbiome data science, and the development … scales ranging from single genes and individual genomes to metagenomes to systems-level modeling and understanding. JGI …

… to large-scale datasets and analysis tools for genomes, metagenomes, and metabolomics through its data portals. …