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Microbiome Data Science Team
… Biology is currently experiencing a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential … analysis and interpretation is creating new opportunities for breakthrough discoveries and catalyzing a major … The research efforts of the group have concentrated in demonstrating the …
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Fungal & Algal Program
… The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and … and biogeochemistry. This research helps translate their genomic potential into practical applications, including …
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How to Submit Sequencing Samples
… Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes … 1) Review JGI sample QC requirements and protocols Obtaining DNA and RNA of … quantity and quality has been the rate-limiting step for many projects at the JGI. The quality of the starting …
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Mission
… JGI Mission As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic capabilities, large-scale AI-ready data and … Biological systems hold extraordinary potential to power innovation … and AI-driven analyses that convert biological information into actionable insights and solutions. …
Learn more
CSP Functional Genomics
… The CSP Functional Genomics call is to enable users to perform state-of-the-art … All proposals will be externally peer-reviewed for … data usage by the applicant/community, and track record of the applicant.  Learn about the general review process or … of insufficient quality or quantity will preclude approval for processing. …
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Institutional User Agreements
… Every approved proposal starts with a User Agreement — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing … of the JGI User Agreement , JGI User Agreement for Federal Agencies , DNA Synthesis Appendix  and DNA …
Learn more
Natural Prodcast Episode 12: Nadine Ziemert
… DAN UDWARY: You’re listening to the Department of Energy … welcome, Nadine. ALISON TAKEMURA: What is the big picture for you in your lab? NADINE ZIEMERT: Big picture, I want to … I think GTDB also started that. But I think taxonomy and genomic data are still kind of a mess. DAN UDWARY: Yeah, …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to … work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … to: Build curiosity and illustrate the value of comparative genomic analysis Expose students to peer review process, …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… DAN UDWARY: You’re listening to the Department of Energy … Mexico, and an incredibly bright guy who’s been thinking for a long time about the evolution and natural products … I think the important thing to remember is that, thanks to genomics, we now know that it is very hard to find stuff …
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Sequencing Technologies & Products
…   Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust offering of sequencing capabilities and products to our … sample processing and sequencing capabilities. The Genomic Technologies Group, which includes the Sequencing …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… DAN UDWARY: Hey, everyone! Welcome to the “Self Promotion … Doering and Bryce Foster and too many others to name at JGI for the last two years or so. SMC is now released and ready … genomes. But IMG is microbial genomes — mostly bacteria and archaea. And we knew that secondary metabolism is …
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Offerings & Capabilities
… The central mission of the JGI’s Genomic Technologies department is   ensuring users have … needs, the JGI deploys state-of-the-art sequencers and platforms dedicated to synthesis, single-cell analyses and … Deputy of Genomic Technologies …
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