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Microbiome Data Science Team
… a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential … is creating new opportunities for breakthrough discoveries and catalyzing a major transition of biology … A global metagenomic map of urban microbiomes and antimicrobial resistance. Cell . 184(13):3376-3393 Almeida A, et …
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Metabolomics Program
… enhance our understanding of genome science, organisms, and ecosystems at the molecular level. Integrating genomics with metabolomics fuels the discovery  of novel … exploration of energy and nutrient exchange, as well as microbial and plant responses to environmental changes. With …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… proposal.  Submit research proposals  here that integrate genomics with nanoscale science, accelerating discoveries and developing transformative bio-based … The program seeks user proposals that integrate genomics with nanoscale science, accelerating discoveries …
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Natural Prodcast Episode 11: Marnix Medema
… “BiG” branded family I think. Marnix Medema: Yeah. It’s an ecosystem of software right? Dan Udwary: For sure. Yeah. … IMG kind of hooks into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial genomes. And … into families, which you can also look at in BiG-FAM . This ecosystem for secondary metabolism has become transformative …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… but also those molecules that mediate a well functioning ecosystem and environment and earth. So yeah, it’s like … streams. This will all become clearer as we get into the genomics. So– ALISON TAKEMURA: I’m just enjoying the ride … of the IMG data portal , which is a larger portal for microbial genomics. IMG stands for Integrated Microbial …
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Natural Prodcast Episode 16: Marcy Balunas
… tell us about this squid-microbe relationship. Or is it a microbial community with microbial community relationship?  MARCY: Yes. So I would … of these. And so Spencer and his group have done the microbial profiling for what’s in there. It’s a fairly well … product diversity and understanding its contribution to ecosystem function in the cellulolytic fungus-growing ant …
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Natural Prodcast Episode 20: Brian Bachmann
… bruises. So yeah. So it was– the story is, let’s look at an ecosystem that has never been exploited. Because it’s been … of thought with that. So some people are interested in cave microbial– people are interested in the more extreme … mechanistic enzymology to natural product biosynthesis to genomics to directed evolution– but it’s just the– it really …
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Fungal & Algal Program
… Fungi, with million species, are essential for ecosystem functioning — particularly in their roles … into bioenergy and bioproducts. The program’s fungal genomics research explores new metabolic processes and … Program aims to streamline genome analysis workflows for microbial eukaryotes, build fungal and algal pangenomes, and …
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Single Cell Research Group
… in 1985, which highlights our skewed understanding of microbial metabolism towards a minority of cultivated … focused on the application of  function-driven single-cell genomics . Here, single cells are characterized and selected … Chris Rinke: Research Officer, Australian Centre for Ecogenomics Patrick Schwientek: Cofounder & CTO, Oralta …
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Synthetic Biology Lab
… on integrating database mining and sequence design with scaling the production of large, difficult to synthesize …
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DNA Synthesis Program
… The program has been a pioneering effort in functional genomics since 2012, with a focus on addressing critical … Program plays a central role in advancing functional genomics, focusing on developing genetic systems that can … access, visualization, and analysis tools for comparative genomics of fungi. Mycocosm enables users to navigate across …
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Who We Are
… of 225 researchers and support staff in the Integrative Genomics Building in Berkeley, California.  Our location at … from plants, fungi, algae, non-medical microbes, microbial communities, and other relevant organisms. We … HudsonAlpha Institute for Biotechnology , and the Arizona Genomics Institute. We are located in the Integrative …
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