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Products
The JGI has diverse capabilities in: DNA and RNA sequencing, … Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of the … as target cycle times from sample receipt to completion of standard analysis.  Raw data is provided for all sequencing …
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Publication Policy
The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce … work in a way that goes beyond the deliverables for JGI standard products   and/or make substantial intellectual …
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Environmental Genomics Group
Our aim is to more fully capture microbial and viral diversity, leading to a better understanding of microbial … . 2020 Nov 9. Vyshenska, Dariia et al. (2023)  A standardized quantitative analysis strategy for stable … Clum, A. et al. (2021)  DOE JGI metagenome workflow …
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Secondary Metabolites Program
…   The JGI’s Secondary Metabolites Program focuses on the … program aims to tap into the largely unexplored biochemical diversity within secondary metabolites, expanding their … metabolite production is often not fully realized under standard laboratory conditions, with only a small portion of …
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Fungal & Algal Program
The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for … and advanced genomic analysis to explore the rich diversity of fungi and algae. These organisms play a … an international research team in collaboration with the JGI. Conserved Fungal Genes of Unknown Function offer a …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… is that you could, therefore, expect a lot of chemical diversity. So many compounds will fulfill the same function. … described it, I thought of primary metabolism as being the standard set of shared reactions that most living organisms … thing. Another way to approach it is more related to what JGI does, which is sequence genomes. And we just published …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… to the California gold rush. And we’ll talk about a new JGI paper that’s just come out where I got the chance to do … right, got it. And just thinking about it from I know the JGI perspective here at the Joint Genome Institute, because … Yeah, bacteria sound like a good place, to me, to look for diversity because there are so many bacteria, because it is …
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Frequently Asked Questions: Proposal Submission
… go to the proposal submission page , login using your JGI account (create one here if you don’t already have an … or to be listed as co-PIs or collaborators.   JGI’s standard User Agreement must be signed before work can … activity. A few examples include: Convention on Biological Diversity Nagoya Protocol on Access and Benefit Sharing …
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Plant Program
With collaborative user projects, the JGI’s Plant Program delves into the natural world’s … for key plant species, enhancing our understanding of plant diversity and integrating various data types to explore the … carefully selected by the community to evenly sample the diversity of the plant kingdom and allow ancestral …
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Mission
JGI Mission As a U.S. Department of Energy Office of Science … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a DOE Office of Science User Facility at Lawrence … … Microbes constitute the largest reservoir of biodiversity and functional versatility on Earth. Their …
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Natural Prodcast Episode 14: Nigel Mouncey
… and head of the Secondary Metabolites Science Program at JGI, and also my boss, Nigel Mouncey. I got him on to talk … A few examples of those are obviously expanding the diversity of known secondary metabolites and their … six sessions this year. Great speaker line up. We have a poster session. We have these lounges as well where people …
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Viral Genomics Group
… and computational exploration of uncultivated viral diversity, characterization of molecular mechanisms involved …   19 , 407 Berg, M. et al. (2021) Host population diversity as a driver of viral infection cycle in wild …
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