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Metagenome Program
… elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses several … processes. This research provides insights into microbial diversity and metabolic potential, with implications for … environments, the Program provides a snapshot of microbial diversity and their metabolic functional potential. This …
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Products
… The JGI has diverse capabilities in: DNA and RNA sequencing, … Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of the … as target cycle times from sample receipt to completion of standard analysis.  Raw data is provided for all sequencing …
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Secondary Metabolites Program
…   The JGI’s Secondary Metabolites Program focuses on the … program aims to tap into the largely unexplored biochemical diversity within secondary metabolites, expanding their … metabolite production is often not fully realized under standard laboratory conditions, with only a small portion of …
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Fungal & Algal Program
… The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for … and advanced genomic analysis to explore the rich diversity of fungi and algae. These organisms play a … efforts that survey the vast phylogenetic and ecological diversity of fungi and algae, examining both natural …
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Who We Are
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at Lawrence Berkeley National Laboratory. The JGI consists of 225 researchers and support staff in the … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a high-throughput AI-centric genomic science user …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… is that you could, therefore, expect a lot of chemical diversity. So many compounds will fulfill the same function. … described it, I thought of primary metabolism as being the standard set of shared reactions that most living organisms … thing. Another way to approach it is more related to what JGI does, which is sequence genomes. And we just published …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… Access to the Molecular Foundry and use of JGI capabilities is free. The JGI supports remote users. Users conduct experiments in … living, local transportation, and travel costs. The cost of standard incidentals related to the user project (such as … them as part of the user calls. Please refer to the JGI CMM call available here, which includes the capabilities …
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Viral Genomics Group
… and computational exploration of uncultivated viral diversity, characterization of molecular mechanisms involved … is still limited. One key challenge is to complement diversity surveys ( Who is there? ) with activity … measurements ( Who is active when/where, and how? ). The JGI Viral Genomics group attempts to address this question …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… to the California gold rush. And we’ll talk about a new JGI paper that’s just come out where I got the chance to do … right, got it. And just thinking about it from I know the JGI perspective here at the Joint Genome Institute, because … Yeah, bacteria sound like a good place, to me, to look for diversity because there are so many bacteria, because it is …
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Metabolomics Program
… The JGI’s Metabolomics Program works to uncover the roles of … of experimental workflows and computational analysis, JGI scientists are able to link metabolic activity with gene … In support of user science, the JGI Metabolomics Platform delivers rich metabolite profiles …
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Frequently Asked Questions: Proposal Submission
… go to the proposal submission page , login using your JGI account (create one here if you don’t already have an … or longer to obtain with no guarantee of approval.    JGI staff are not eligible to submit proposals, or to be listed as co-PIs or collaborators.   JGI’s standard User Agreement must be signed before work can …
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Natural Prodcast Episode 14: Nigel Mouncey
… and head of the Secondary Metabolites Science Program at JGI, and also my boss, Nigel Mouncey. I got him on to talk … A few examples of those are obviously expanding the diversity of known secondary metabolites and their … six sessions this year. Great speaker line up. We have a poster session. We have these lounges as well where people …
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