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Data Policy
Data produced and released by the US Department of Energy (DOE) Joint Genome … accepted FY22 and later through the Community Science Program (CSP), Facilities Integrating Collaborations for User … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …
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Metabolomics Program
The JGI’s Metabolomics Program works to uncover the roles of small molecules in … also enables exploration of energy and nutrient exchange, as well as microbial and plant responses to environmental … processes, development of high performance plants and microbes, and understanding microbiome interactions. The  …
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Microbiome Data Science Team
… important biotechnological applications (e.g., new CRISPR-Cas variants and new CRISPR-Cas types) (Nature Communications … and massive reconstruction of genomes from uncultivated microbes (Nature 2019). Other projects in the group include … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …
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Metagenome Program
The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work encompasses bacteria, archaea, and micro-eukaryoes, along with …
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Institutional User Agreements
… rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is usually an individual in a central office, such as President, Rector, CEO, Sponsored Projects … were approved by the DOE to address the DNA Synthesis program. When fully executed, the new User Agreement will …
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Natural Prodcast Episode 19: Bill Fenical
… so much history from this conversation about why the ocean was basically unexplored until the 70s, and how diving was … of salary, I really got busy and I started to create a program that involves researching the local marine environment. … you think about the fact that, when plants and animals and microbes evolve, they evolve to make molecules that improve …
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Microbial Program
The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those …
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User Support
… carries out a number of activities to facilitate world-class science. DOE JGI Project Managers collaborate with users … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs … to users Coordinate meetings with DOE JGI Science Program leads Solicit user feedback about your overall …
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Complete genome sequence of Veillonella parvula type strain (Te3T)
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US … the information. The team harnessed a community-science program to collect samples from across the country to …
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Frequently Asked Questions: Project Management
Work Initiation Process (WIP) interface.    For commonly asked questions about JGI’s proposal calls and proposal … be accessed via the Genome Portal , at the following sites: Microbes: IMG (citation: https://doi.org/10.1093/nar/gkaa939 … for individuals associated with your proposal. Find our Publications Policy on our Data Policy & Support page.    … …
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Natural Prodcast Episode 10: A Primer on Genome Mining
Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural products and the science and … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … let us know. Find out more at https://jgi.doe.gov/user-programs . Thanks, and see you next time. … Episode Transcript …
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