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Natural Prodcast Episode 14: Nigel Mouncey
… … DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took … spinoza . And the other is spinetoram which is a semi-synthetic derivative of an intermediate in the spinosyn … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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User Support
The JGI Project Management Office carries out a number of activities to facilitate … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs are also shipped at this time. Your …
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Natural Prodcast Episode 10: A Primer on Genome Mining
DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … trying to locate and sequence and get the information on biosynthetic gene clusters. And I’ll explain all this. So but …
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User Programs
… and analysis will be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user … projects that call for expansive sequencing, synthetic biology and metabolomics capabilities … be preceded by Letters of Intent. Proposals may include synthetic biology, sequencing and metabolomics. Proposals …
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An analysis of codon bias in six red yeast species
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Institutional User Agreements
… — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing data for synthesis. This agreement, required … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …
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Natural Prodcast Episode 11: Marnix Medema
… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … which is using DNA sequence to identify and interpret biosynthetic, secondary metabolism pathways. And today, we get … Germany were working on a very similar project like six months after I started. Another PhD student, Kai Blin, …
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Natural Prodcast Episode 12: Nadine Ziemert
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … And I could see a certain time span within these biosynthetic gene clusters. There’s gene fusion going on, and … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …
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Natural Prodcast Episode 4: Nancy Keller
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … aflatoxin being a secondary metabolite from an Aspergillus species that is pretty toxic – can cause liver cancer and … the fungi vary in number of chromosomes. Like, ironically, yeast, which has a small genome has 15 chromosomes. Where …
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Partnerships: Myco-Ed
Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology teaching labs. The purpose of the program is to: train students and professors in … through isolation and genome sequencing of new fungal species.  Students collect fungi, sterilize tissue, isolate …
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Sequencing Technologies
Group applies cutting edge molecular capabilities and state-of-the-art next-generation sequencing to enable biological … checks, and prep libraries for sequencing. They apply Lean Six Sigma practices to process optimization and development … The team works hand in hand with the Project Management Office to help ensure the JGI’s genomic capabilities are …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… schedule. This should be coming out on the first Thursday of the month, just like I promised. Now I just have to make … sensing and its effects on regulation of natural product biosynthetic pathways, which led her to a successfully funded … shown today is it's more a quorum sensing within a single species. DAN: Within a species. Genus? BETSY PARKINSON: So …
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