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The JGI aims to inspire more students to enter the STEM workforce by fostering an understanding of our role in advancing the energy and environmental … internship partnership that started in the summer of 2014. … Modeled on the JGI-UC Merced internship program, …

PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way … PI and receive permission for their planned work.   … For sequencing or metabolomics projects: data are subject to a  … or citation of accession numbers in a peer-reviewed journal, or any public deposition of the data at outside …

The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, DNA synthesis … community, such as a microcolony, microbial aggregate, or a specific subset of free-living cells. Extracted DNA may be …

… . And then coming up after that, we’ll have a lineup of international scientists who also do genome mining. We’ve got a … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … of a polyketide synthase. Each domain catalyzes some specific reaction. And so I would take a collection of …

Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology … students and professors in laboratory techniques and data analyses compile original data for improving fungal genomic … resources empower students through isolation and genome sequencing of new fungal species.  Students collect fungi, …

The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … the program offers single-cell sequencing, resequencing, RNA sequencing and epigenomics. Expansion of sequence …

… that will be subject to the DOE JGI’s capabilities for sequencing, synthesis and/or metabolomics. Once materials … issues, as needed Users are notified as projects reach specific milestones, either by automated emails or emails … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …

The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in … and viral activity, transcription regulation, and noncoding RNAs in microbiomes. The insights from this work have the … the research community to perform large-scale multi-omics analyses on new and existing microbiome data.   … The IMG/M …

… capabilities support researchers exploring how to convert sequence into functional assessments. This is done by … automations for DNA design, assembly and analysis Overview of synthesis products The JGI DNA Synthesis platform enables … up to ~150 Kb in length  Pooled libraries such as sgRNA, promoter or MoClo assemblies … Check out our …

Alison Takemura, who’s moved on from JGI to do real journalism, and we wish her all the best. Later on, I’ll … you may have hear over there, with a few more questions specific to secondary metabolites. I hope both versions are … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …

… functional genome annotation, improves understanding of the role small molecules play in diverse biological … are identified using LC-MS/MS methods optimized for specific types of molecules.   … Find more details on the … instrumentation we use and our methodology for metabolite analyses.  … Read more about our submission guidelines, what …

… and the 90s. And so we started to be able to explore DNA sequencing and actually get to the DNA sequence – sequences … produce secondary metabolites. Do you recognize this? DNA 🡺 RNA 🡺 Protein ALISON: This is central dogma. DNA to RNA to … systems are also everywhere – that there are some very specific patterns and shared DNA across all of these things. …