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New Lineages of Life Group
… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C … (2022) Giant virus biology and diversity in the era of genome-resolved metagenomics. Nature Reviews Microbiology …
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Natural Prodcast Episode 23: Aaron Puri
And it actually was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that … so far is that you can have very, very disparate amino acid sequences for synthases that produce the same signal. So … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …
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FICUS
… for researchers to request the capabilities and expertise of multiple DOE National User Facilities in one research … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS … for Structural Molecular Biology . … Accessing NEON’s Environmental Sample Archives, Applying JGI and EMSL Omics …
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Seven genome sequences of bacterial, environmental isolates from Pony Lake, Antarctica.
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Single Cell Research Group
Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of … in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …
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DNA Synthesis Program
The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of … since 2012, with a focus on addressing critical energy and environmental challenges. Through innovative research in … the DOE's vision for a sustainable, bio-based economy. … Genome to Enzymes and Pathways focuses on discovering and …
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Metabolomics Program
The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular … exchange, as well as microbial and plant responses to environmental changes. With advanced mass spectrometry …
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Natural Prodcast Episode 12: Nadine Ziemert
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …
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Fungal & Algal Program
The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the …
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Products
Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) … features in spectra. 167/214 Metagenome Metatranscriptome Environmental transcript sequence Assembly, annotation ( …
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Data Policy
Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …
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Natural Prodcast Episode 20: Brian Bachmann
… in the early 2000s called Ecopia, which was a very early genome mining company, back when DNA sequencing of natural … is providing, which is a giant warehouse full of microbial sequences. So let’s say you’re interested in improving a … new gene cluster. And then they would find it in seven other organisms. And one of those would just produce …
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