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… develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct … and viral diversity, leading to a better understanding of microbial communities and ecosystem function.  The … Our research focuses on the assembly of metagenomic sequence data into microbial genomes, which is of …

… The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, advancing the development of … innovative research in synthetic biology, the program enables the design and synthesis of complex genetic pathways …

… more than 50,000 genomes that we derived from meta-genome sequences. As always, you’ll find transcripts and show notes … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … in one package so that it opened up secondary metabolism identification to anyone who wanted to do it. And it’s been …

… The JGI is leveraging its current partnerships to offer new capabilities and resources to users through a BER … is discoverable and accessible. Linking the resources of powerful institutions like the JGI, KBase, NCBI, NMDC, EMSL and the Protein Data Bank enables predictive ecosystem biology. The collaborations …

… The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, … environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the biological …

… schedule. This should be coming out on the first Thursday of the month, just like I promised. Now I just have to make … they won't. They've been turned these clustered situated regulons, but that might not be quite as true as we once … usually serve as dimers, and then they will bind to certain sequences of DNA. And when they bind to those certain …

… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … advances in management, processing and visualization of “big data,” and artificial Intelligent/machine learning … (Nature 2019). Other projects in the group include the sequencing and comparative analysis of thousands of archaeal …

… Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to … the need to have a limited and time-sensitive protection of certain types of data to support their use by those generating data. The … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … took an approach that was kind of a simplified metagenome sequencing approach to pick this system apart.  DAN:  And … doing was pursuing with Jacques Ravel, at TIGR, metagenome sequencing, which was very early days for that technology. …

… I think. DAN UDWARY: Yeah, and that was a JGI Community Sequencing Project. You’re right, yeah. NADINE ZIEMERT: Yes. … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … existing technology. And a lot of that was around chemical identification technology, mass spec, NMR. And we talked a …

… things, because a lot of what we do at JGI in terms of the sequencing that we do is very people-disconnected, and … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as … find some interesting leads and need help with isolation or identification of those compounds. But again, for the …

… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … drive innovations that could advance our understanding of Earth’s ecosystems. … The Metagenome Program focuses on the high-throughput sequencing of microbial communities to uncover the complex …