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Natural Prodcast Episode 10: A Primer on Genome Mining
DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … you. We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, and natural products in …
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Natural Prodcast Episode 8: Eric Schmidt
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … you! We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, and natural products in … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a … you. We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, and natural products in … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …
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Natural Prodcast Episode 17: Cassandra Quave
I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as … who we are.  ALISON TAKEMURA: I had a question about the complexity of the problem so and the scale. So thinking … you. We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, and natural products in …
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Natural Prodcast Episode 12: Nadine Ziemert
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … you. We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, and natural products in …
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Metagenome Program
… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … approaches to assess microbial activity across ecosystems.  By studying microbial communities and their interactions, … stable isotope probing (qSIP)-metagenomics and metatranscriptomics, to metagenomics and metabolomics data, …
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Revealing the transcriptomic complexity of switchgrass by PacBio long-read sequencing
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Products
Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … Fungal Standard Draft Whole genome shotgun sequencing using long-read sequencing. Exact library types and quality of … ), mapping 273/273 Metagenome Cell Enrichments Obtained by physical separation of a biologically relevant unit from …
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Viral Genomics Group
… however they do so under strong constraints exerted by viruses. Research in the viral genomics group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …
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Natural Prodcast Episode 4: Nancy Keller
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … and that’s exciting to me. I also like it because of the complexity. They’re more complex than bacteria. Not that … you! We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, and natural products in …
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FICUS
… for researchers to request the capabilities and expertise of multiple DOE National User Facilities in one research … beyond what each of these facilities could generate by itself.   Accepted projects must address or be otherwise … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS …
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FICUS-NERSC/KBASE
The mission of the Joint Genome Institute is to serve the scientific … next review cycle. All proposals undergo technical review by JGI staff as well as staff at the other participating … more customized analysis, the JGI also participates in publication of results. … Submission … More on Sequencing …
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