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… Hey, Alison Takemura: Hey, Dan. Dan Udwary: Today we’re going to talk to Kate Duncan. And Kate is– I should ask, you … here today, and we wanted to talk to her about a whole list of things. So we have a Scripps background shared together, … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …

…   The JGI’s Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient … Program targets the vast and underexplored reservoir of secondary metabolites produced by bacteria, fungi, algae …

… know that that’s ever necessarily like a good description of anyone because chemistry means a lot, especially when … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … synthase is very easy to search for because there are patterns of domains, protein domains that you look for. And …

… DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the afternoon of the day I’m due to release it, … Episode Transcript … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

… Research in the Woyke laboratory focuses on the utility of … taxa of interest. One such effort is targeted at environmental cells that are from candidate phyla, major … gap is also reflected in the strongly biased representation of sequenced genomes in the public domain, the bulk of which …

… The Facilities Integrating Collaborations for User Science (FICUS) call … for researchers to request the capabilities and expertise of multiple DOE National User Facilities in one research … provides customized analysis, the JGI also participates in publication of results. …

… starts with a User Agreement — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …

… The JGI is leveraging its current partnerships to offer new capabilities and … (ESNet), the JGI has unique access to both expertise and infrastructure to facilitate these efforts. Particular areas of emphasis will be the development of tools and … and understanding. JGI and KBase are designated DOE Office of Science Public Reusable Research (PuRe) Data …

… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … The Metagenome Program focuses on the high-throughput sequencing of microbial communities to uncover the complex interactions …

… Plants are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental … fungi, viruses. Resident viruses can be found in a myriad of bacterial strains, whereby they can modulate host …

… Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … is granted to proposal PIs, Co-PIs, and collaborators of any given proposal. Third parties (often referred to as … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …